Gene Gbem_3965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3965 
Symbol 
ID6780829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4502429 
End bp4503007 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content60% 
IMG OID642769960 
Productpeptidyl-prolyl cis-trans isomerase cyclophilin type 
Protein accessionYP_002140753 
Protein GI197120326 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000414248 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAAA GAATCATGCT GGTGGCGGTC CTGTTACTTT GCTTCGCCGG CAGCGCATTC 
GCTGCCGAAA CAAAGAACCC GGTCGTGGTC ATTGAGACCA GCCAGGGGAA CGTGAAGGTG
GAACTGTTCG AGAAGGAAGC TCCCTTGAGC GTGAAGAACT TCCTGGAGTA CGCGAAGAGC
GGGTTCTACG AGGGGACCAC CTTCCACAGG GTCATTCCCG GCTTCATGAT CCAGGGCGGC
GGGCTCACCA AGGACATCGC CCCCAAGGCG ACCCGTGCAC CCATCAAGAA CGAGGCCAAT
AACGGCCTGA AGAACGACCG CGGGACCCTG GCCATGGCGC GTACCGGCAT GGTCGATTCG
GCTACCTCGC AGTTCTTCAT CAACGTCGTC AACAACGGCT TCCTGAACCA CAACCCGGCC
GGCGGCCAGA GAACCTTCGG CTACGCCGTG TTCGGCAAGG TGCTGGAAGG GATGGACGTG
GTCGACAAGA TCGCCGCCAC CCCGACCGGG TTCAAGAACG GCATGCCGGA CGTCCCCGCA
ACGCCGGTAG TGATCCAGAG CGTGAAGGTA GTGAAGTAG
 
Protein sequence
MLKRIMLVAV LLLCFAGSAF AAETKNPVVV IETSQGNVKV ELFEKEAPLS VKNFLEYAKS 
GFYEGTTFHR VIPGFMIQGG GLTKDIAPKA TRAPIKNEAN NGLKNDRGTL AMARTGMVDS
ATSQFFINVV NNGFLNHNPA GGQRTFGYAV FGKVLEGMDV VDKIAATPTG FKNGMPDVPA
TPVVIQSVKV VK