Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3942 |
Symbol | |
ID | 6780806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 4479056 |
End bp | 4480867 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642769937 |
Product | CheA signal transduction histidine kinase |
Protein accession | YP_002140730 |
Protein GI | 197120303 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.160012 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTATAG ACTGCGAAGA TCAGGAGCTA CTCGAAGGTT TCCTTGCGGA AACCACGGAA CTCCTCGAAA AACTTGACGA CGACCTGATC ACCTTGGAGA AGAGCCCGGA CGACGCCGAA CTGATGAATC GGATCTTCCG CTCCATCCAC ACGGTCAAAG GGGCCTCCAG CTTCCTCGGG TTCGACATGC TGGTCAAAGT GACTCACAAG ACCGAGGATG TGCTGAACCG CCTGAGAAAG GGGGAGCTCT TCCTCAACCC AGAGATCATG GACGTGATCC TGGAGGCGGT CGACCTGGTG AAGACACTGG TGGCCGACAT CAAGGGAGGG GATATCGTCG AGAGGGACCT CGAGGGGACC ATCTCCAAGC TGATTCCGTT TCTCTCCGAG AACGCGACCG AAGCTACGGT GCTCGCCCCT ACCTCGGCTC CCAAGGAGGA GAAGGTCGCG ACGCCTCCTC CCCCCGAGTC AGCCGCGGAT GCAGAAGCGA AAGCAGCCGG TGAGAAGGAG AGCGCACCCG CCGATACCGG TGCGCCCACA ACGGCAGCCG CGGCGCCGGT GGCGCAGCCC AAGCCTCAGC CGGTCAAGGA GCCGCAAAAG CCTGCCCCCA AAGGGGAGGA GCTGGCCGAC AACTCCACCG TGCGCGTCGA CGTGAAGCGC CTGGACGACC TGATGAACCA GGTCGGCGAG CTGGTGCTCG AGCGCAACCG GATGATCCAG CTGCACAGCG ACTACCAGAC GGGTCTCGAC CCCACCGGCT TCGGCGATGA TTTCGGGAAA CTCTCCAAGA GGCTCAACTT CGTCACCTCC GAGCTGCAGA TGCAGGTTCT CAAGATGCGG ATGCTGCCGG TGGAGAAGGT CTTCAAGAAG TTCCCGCGCA TCGTCAGGAA TCTGGCGCGC GACCTCGGCA AGGAAGTGGA CTTGGTCATC ATCGGCGAGG AGACCGAACT CGACCGCTCC GTCGTCGACG AGATCGGGGA CCCCTTGATC CACCTGATCC GCAACGCCCT GGACCACGGC CTGGAAACTC CGGACCAGCG CCTTTCCGCC GGCAAGGACC GCACCGGCAC CGTGGTCCTC TCCGCCGCCC ACGAGGGGAA CCAGATCGTC ATCAGCATCA AGGACGACGG CCGGGGCATA GACCCCGAGC GGATCTCGAA GAAGGCGCTG GAGAAGGGGC TCGTCACCGA GGAACAGCTC GCTTCCATGG GGAACCGCGA GATCCTCGAC CTCCTCTTCC TCCCGGGCTT CTCGACCAAG GAGCAGACCA CCGACCTCTC CGGCCGCGGC GTCGGCATGG ACGTGGTGCG CACCAACATC AGGAAGTTAA ACGGCATCAT CGAGATCAAA AACGACGTCG GGCACGGCAC CGAGTTCATA CTGAAGCTCC CGCTCACCCT GGCCATCATC CAGTCCCTGC TGGTGGAGGT GGAGAAGGAG GTCTACTCCA TACCGCTTGC GTCGGTCATC GAGACCATGC GGGTGAGCAA GAGCGAGTTC CACATGATCG GCGGACAGGA AGTGCTCAAA TTGAGGGACT CGGTGCTCCC GCTCCTGCGG CTGCAACAGA CCTTCAGCTG CCAGGAGGTC TACACCGATC GCGACACCTG CTACGTGGTC ATAGTCGGCG TAGCCGAGAA GCGCATCGGC CTCATCGTCA CCAGGCTCCT GGGGCAGCAG GAGGTCGCCA TCAAGTCGCT GGGCAAGTTC CTGGCCAATC TTCCTGGCAT CGGCGGTTCA ACCATCATGG GCGACGGGCG GGTGGCACTG ATCGTGGATC CGATCGGTCT GATCGGGGGC GGGGCAGCCT GA
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Protein sequence | MAIDCEDQEL LEGFLAETTE LLEKLDDDLI TLEKSPDDAE LMNRIFRSIH TVKGASSFLG FDMLVKVTHK TEDVLNRLRK GELFLNPEIM DVILEAVDLV KTLVADIKGG DIVERDLEGT ISKLIPFLSE NATEATVLAP TSAPKEEKVA TPPPPESAAD AEAKAAGEKE SAPADTGAPT TAAAAPVAQP KPQPVKEPQK PAPKGEELAD NSTVRVDVKR LDDLMNQVGE LVLERNRMIQ LHSDYQTGLD PTGFGDDFGK LSKRLNFVTS ELQMQVLKMR MLPVEKVFKK FPRIVRNLAR DLGKEVDLVI IGEETELDRS VVDEIGDPLI HLIRNALDHG LETPDQRLSA GKDRTGTVVL SAAHEGNQIV ISIKDDGRGI DPERISKKAL EKGLVTEEQL ASMGNREILD LLFLPGFSTK EQTTDLSGRG VGMDVVRTNI RKLNGIIEIK NDVGHGTEFI LKLPLTLAII QSLLVEVEKE VYSIPLASVI ETMRVSKSEF HMIGGQEVLK LRDSVLPLLR LQQTFSCQEV YTDRDTCYVV IVGVAEKRIG LIVTRLLGQQ EVAIKSLGKF LANLPGIGGS TIMGDGRVAL IVDPIGLIGG GAA
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