| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3925 |
|---|
| Symbol | |
|---|
| ID | 6780789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 4464151 |
|---|
| End bp | 4464663 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642769920 |
|---|
| Product | NADH-quinone oxidoreductase, B subunit |
|---|
| Protein accession | YP_002140713 |
|---|
| Protein GI | 197120286 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000298768 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGTAG ATCAGCCGCT TGGCGAAAAC ATCATCACGA CTTCCCTCGA CAGCCTGGTC
AACTGGGCCA GGAAGTCCTC CATCTGGCCG ATGACCTTTG GTCTTGCCTG CTGCGCGATC
GAGATGATGG CGACCGGTGC GGCCAAGCAT GACCTGGACC GTTTCGGTAT CATCTTCCGC
GCCTCACCCC GCCAGGCAGA CTGCATCATC ATCGCCGGCA CGGTGACCAA GAAGATGCTT
CCGGTCATCA AGACCGTGTA TGAGCAGATG CCCGAACCGA AGTGGGTGGT CGCCATGGGC
GCCTGCGCCT GCTCCGGCGG CGTCTTCGAC ACCTACTCCG TCGTGCAGGG TATCGACGAG
GCGCTTCCGG TCGATGTCTA CATCCCGGGC TGCCCGCCGC GTCCGGAGGC ACTCCTTTAC
GGCCTTCTGA AGCTCCAGGA TAAGATCGCC AACGAGCGCA ACTCTTTCGG CTCTTCCATC
GGCTTGGGCG AAAGACTCGA ACCGGCTGCT TAA
|
|---|
| Protein sequence | MGVDQPLGEN IITTSLDSLV NWARKSSIWP MTFGLACCAI EMMATGAAKH DLDRFGIIFR
ASPRQADCII IAGTVTKKML PVIKTVYEQM PEPKWVVAMG ACACSGGVFD TYSVVQGIDE
ALPVDVYIPG CPPRPEALLY GLLKLQDKIA NERNSFGSSI GLGERLEPAA
|
|---|
| |