Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3797 |
Symbol | ispD |
ID | 6780661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 4336254 |
End bp | 4336949 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642769792 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
Protein accession | YP_002140585 |
Protein GI | 197120158 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.141467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCAGGA TTTACGCGCT GATACCTGCC GCCGGAATGG GCAAAAGGAT GGGTGCCGGC TCCAACAAGC AGTACCTGCT GCTGGACGGC ATGCCGATTC TCGCCCGCAC CGTCGCAGCC TTCGAGGCGG CCCCCTTCAT AGACGGGATC TACCTCGTTT CGCCGGAGCA GGAGATCCCG TTTTGCCGCA GCGAGGTGGT CGACCATTAC GGTTTTTCCA AGGTGCGCGC CATCGTCCCC GGCGGGGCCG AGCGGCAGCA CTCGGTCTGC AACGGGCTGG ACGCCATGGC TGACGCTGCT GACGACGACC TGGTGCTGAT CCACGACGGG GTGCGCCCTT TCGTTTCGCA AGAGATGCTG GAAGCCGCCG CTGACGCCGC CAGGGAACAT GGCGCATCCG TGGTCGCGGT CCCGGTGAAG GACACGGTGA AGGTGGTGAA AGGCGGCGTC ATCTCCGAAA CCCCGCCTCG CGAAGAGCTC TGGTTGGCGC AAACGCCGCA GGCTTTCCGC TATGGCCTGA TCCGCGATGC CCACGCGCGT GCAAAGGCGG AAGGGTATCT GGGGACCGAC GATGCGTCCC TCGTCGAGCA TCAGGGGGGA GAGGTGCGCA TCGTCACGGG CGACTACCGC AACATCAAGA TCACGACGCC CGAGGACCTG GTCCTTGCCG AGGCGTTTTT GAAAGGAAAG GGATGA
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Protein sequence | MSRIYALIPA AGMGKRMGAG SNKQYLLLDG MPILARTVAA FEAAPFIDGI YLVSPEQEIP FCRSEVVDHY GFSKVRAIVP GGAERQHSVC NGLDAMADAA DDDLVLIHDG VRPFVSQEML EAAADAAREH GASVVAVPVK DTVKVVKGGV ISETPPREEL WLAQTPQAFR YGLIRDAHAR AKAEGYLGTD DASLVEHQGG EVRIVTGDYR NIKITTPEDL VLAEAFLKGK G
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