| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3794 |
|---|
| Symbol | |
|---|
| ID | 6780658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 4332254 |
|---|
| End bp | 4333306 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642769789 |
|---|
| Product | TrkA-N domain protein |
|---|
| Protein accession | YP_002140582 |
|---|
| Protein GI | 197120155 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.434274 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCCGG TCCGGCACCT GAAAATCTCG ATAGGAGTAT TGTTGCTCCT GCTGTCGTTC
GGCACCTTCG GCTACATCGC TATCGAGGGG TGGAACGCAC TCGACGCCTT GTACATGACG
GTGATCACCC TGGGCACCGT AGGCTTCAGG GAGGTTCACA ACCTCAGTTC GGCCGGCAAG
ATCTTCACCA TGCTGCTGAT ATTTTTCGGT GTCGGCGTCA TAGGTTACAT CGTGGGCAGC
CTTGCCCAGA TCATGTTCGA GGGGCAGTTT CAGCGGATCA TGGGGAGGAA GAAGGTGGAA
AAGGCGATTG CTGCGCTGGA AGGGCACTAC ATCATCTGCG GGTTCGGGCG GATTGGGTCG
TTGATCTGCA AGGAGTTCTC GGCGAAGCCG CTCCCGTTCG TGGTGGTGGA AAAGGACCCG
GCCATGGTGG ACATCATGGA GCAGGACGGG CCGGGCTACC TGGTGTTGCG CGGCGACGCG
ACCATCGACG ACGTGCTCCT GAAGGCGGGG ATCAAGAAAG CGCGAGGGCT GATTTCGGTG
GTCACCTCGG ACACCGAGAA CGTCTACATA ACCCTCACCG CCCGCGGGCT CAACCCGGAC
CTCTTCATCC TGGCGCGGGC CGGCGAGGAG GGGTCGGAAA TAAAGCTGAA GCGGGCCGGC
GCCAACAAGG TCGTCTCTCC CTATCTCATC GGCGGCTCCC GCATGGCCCA GGCGATACTG
CGCCCGACGG TGGTCGACTT CATCGAGATC GCCACCGGCC ACGAGCACAT GGAACTGCAG
ATGGAGGAAA TCCTGATTCC CCCAGGCTGT GGTTTCATCG GCGAGACCCT GGCCAGTTCC
GGGTTCAGGA AGGAGACCGG GGTCATCATC GTCGGCGTCA AGAAGCAAAA CGGCAAGATG
GTGTTCAATC CGGAGTCCCA CACGAAGCTG GAGGCGCACG ACACGCTGAT CGTTTTGGGG
GAACCCGCGG CGATTCAGAA ACTGGAGCAG TTGGTCGGCT GCGATACCTG CGCCGAAGAA
CTGATCAAAA AGCACAGGAA AAATGATGCC TAA
|
|---|
| Protein sequence | MDPVRHLKIS IGVLLLLLSF GTFGYIAIEG WNALDALYMT VITLGTVGFR EVHNLSSAGK
IFTMLLIFFG VGVIGYIVGS LAQIMFEGQF QRIMGRKKVE KAIAALEGHY IICGFGRIGS
LICKEFSAKP LPFVVVEKDP AMVDIMEQDG PGYLVLRGDA TIDDVLLKAG IKKARGLISV
VTSDTENVYI TLTARGLNPD LFILARAGEE GSEIKLKRAG ANKVVSPYLI GGSRMAQAIL
RPTVVDFIEI ATGHEHMELQ MEEILIPPGC GFIGETLASS GFRKETGVII VGVKKQNGKM
VFNPESHTKL EAHDTLIVLG EPAAIQKLEQ LVGCDTCAEE LIKKHRKNDA
|
|---|
| |