Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3788 |
Symbol | |
ID | 6780652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 4324677 |
End bp | 4328240 |
Gene Length | 3564 bp |
Protein Length | 1187 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642769783 |
Product | hypothetical protein |
Protein accession | YP_002140576 |
Protein GI | 197120149 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAC CCGAGAAGAA AGAGAAGGAC CTCAAAAAAA ACGCCAGCAT CGCCTTTCTC GTTGCTGCAT CGGCATTGGG CCTGGTGCTG CTTTGCCTCG TCGCCTTCCG GATTTACCTC GCCACTTCGT ACCCCGCTTC CCAGCTCTCC CGCCTGGTCA CCGACCGGCT GCAGCAGGAA TTCACCGTCA AGGAGATCGA CCTTTCCGGC AGAACCCTCG TCCTGAAGGG GGTGCGCCTG AAGAACCCTG CGGGGTTTGC TTCCGGTGAA CTCTTCTCGG CGGACAGGGT GGTCATTGCC CCGCGGTGGA TCCAACTCTT GTGGGGACGG CAGCGCTTCG AGCTGATAGA CGTCGAGGGG GGGAAGCTCG CCCTGGAAAA AGATGCCCAC GGCACCTGGA ACTTCGCCGG GATCCAGCGC CGGCTAGCGG CCCGGAGGCC CCCGGGGAAA GCCGCCCCGG AAACGGTGAT CGGGAAGCTC TTGGTGAAAA ACAGCAGCAT CACCATCCAG GGGGAGGGGG TGCACGGAAT CAACCTGCAG GTCTTCAATC TGGCTAGCGG CGGATCGCGC AGCGCACAGG TGGAACTCGC CTTCGAGGAC GGCGCCCGTA ACCGCTATCT GCTTACGGGG ACGGCCCGCC CGGGTGCGGA CGCCGCTGTC GACCTCTCCC TGAAGGCGCC TTCCATCTCC TTAAAAAATC TGGCGTCCCT CTTCAAGCTC AAGGATCCCG AGCCATTCCA GGATGCCCAA GGGGCGCTGC AGGCGAGCGC GGTCCTGGCG AAGGGCGAGC TGAAAAGCAC CGGAAGCTTC TCCTTCCGCA GGGTACTGAT CCCCGCCGCC CGCGGCGACT ATCCCATCGC CGGCCTTTTG CAGTTCAACG GCGTCTACAG CCTCTCCGAG GACACCGCCC ATTTGGATGA AGCCACGCTT ACCATAGACA AGATGGCGCG GCTGCAGGCG GGGGGAACCG TCACCGGCGT GAAGAAGGAA CGGGTGTTCG ACCTCCTTGT TTCCATGGAC GCCGTGGACC TGGCGCTGAT AAACGTGCTA CTGCCGGAGG AATCGCGCCA CGACCTGAAC TTCGGCGGCA GGCTCCGCTG CGAATCGTTG CGCCTGGAAG GAAACGGCAG GGCGGGTATC GAGAGCGTGG TGGGGAACCT GCAACTGCGG GACGGCTTGC TGGCCCGAGA AAAGGACCTG ATCGCGGCGG GGGTGGCGGG AGATCTCGCC CTCTCCCGAC GTGGTGCGAC CGTTTCCGCG CGCGGCAAAT TCTCCCTCCC TCGTCCGGAG CCGAAGGCGC TGGTCCAGGC GCTGGAGCTC CCGGTGGAGT TCACCCTCTC CGCGGGGCTG AAGCCACTTC GCGCCAGGAG CGAGGCGCTA TCTGCGCGGG TCATGGGGGT AGCCGTGTCG GGGAGCGTTG CTTACGACGT GGGGAGCTCC GAGCCGCTAC GGGCCGACCT CGCCTTTGCA ACCAGGGAGC CGGAGCGGCT CAACCCGTGG CTCTCCCGCT ACGGCATGGA GGCGCTCTCC GGAACCGGCA CTGGCAGCGT GCAACTGGCG GGCAAAGGGG CGAAGGAGCT CAGCGCCTCG GCCCGGCTCA TGGTCGCCAA CCTCCAGGGG AAACAGGGGA AGGACAATAT CGGCGTGAAG GCTGGGACGG CGACGGCCAC GGTGAAGAAG CGGGGAGAGA AGCTGCAGGT CCACGGGGAT GCCCGTCTCG CCGCAATCTC CTTTCAGGGA AAGAACGGCG ACGCGCGTTT CGCCTACCGG GTGGCGGACC GCTACCTCTA CCTGAACGGG GTGCAGGCCT CCTGGGGGGA AACCCGCTTC TCCGCCACGA GCCTGAGCGG AGAACTTCCG GGCGCGACAG TGACCGGGCA GCTTACCCGT CGTCCGCTGC GCTTCGATCT GGAGGGGGGG GCGCTCGGAC AGGGCAACTT GCAGCTCTCC GGCATCGCAG GAAGGGTAAG GGGGAGCCTC GTCGGCGAAG GGAAGGATAA ATGGCTGGAT GGAAGCGCCG ATCTCGCCTC CCGCGCACTC TCCTGGCGCA ATGCGGCGAT GGCCGCCCCC GTCCTGCATG CCGTTTTTGC GAGACAGGGT GGAAGGGCCG AACTGAACGG GCAACTGCTG GGGGGGAAGG TGGCGGGAAA GGCGGCCTTT CGCCCCTTTG CCCCGGGAGC GCCGTCCAGC TTCAACGTCA GCATAACCGG CGCCGCCGCG AAGGAGATTT CGCGCCTCGC CGCCGGCGAA GCCGGCACCC GCCCCAGCGC GGGTACCGTG GACTTGAAAC TGGAAGGGAC CAATGCCGGG AAAAGCGGTC TCTCCTGTCG CTTCGACGCC AGGGGGCGGG ACCTGACCCT CGCGAACGCC ACGGGCAAGA CCCTCGTCTC GGGTGCAGCC GCCTCGGTCA AGGGGCGCCT CTCCGGAGGA ACCCTGACCA TCGACGAGGG CACCGTCATG CCGGGCCGGG GCGTTACCCT CACCGCGCGA GGGGAGATAG CGGACGCGCT GTCGGACAAG CGGCGCGGGA CCTTGCTGCT CGCCCTGCCG GATACCTCGT TGAACGACCT GGTGGAGTCG CTCATCAATC TCGCCCCACC GCTGATCCAG GAAGCAACGG TGAAGGGGAG CGTGGCGGCG GAGGGAAGGA TAGAACTGCG TGAGGGACGC AAGATTCTCA ACGGCGGCGT GACGGTGAGA GGGGGGAGGG TGGAGGCGCC AGCCCAGAAA TTCCTGGTGG CGGACCTGAA CGGAAGGATT CCCCTATCTC TGGACTTCGG GGGGAAGGGG AGTGCCGCCC CCCGCGCCGC TGGGGAGTTC AGCAGGGAGA ACTATCCCCG CGTCCTGGCG CAACTGCGCG CAACCCCGCC GGGGGGAGAC CTGCTCACCG TGGAGAAGAT TGGCTTCGGA TCCGTACAGA CCGGAAAGCT CAGCGTGCAA CTTCGTGCGC AAAACGGCCT CACTGAGATC ACCTCCCTGC GCACTACCCT TTACGACGGG ACTGTGTTGG GGAAAGGCCA TCTTCTATTT GCAGGCGAGG CGACCTACCG CGGCGATCTC CTGGTTAACG GTCTCAGCAT GAAGGCCCTG TGCAGGAGCC TCCCCAACCT GGAGGGGTAC ATCTCCGGAC GCGTGGACGG CGTTATCAGC GTGCACGGCA TCGGGGGAGA CCAAAAGCGC CTGACCGGTT TCGTCGATCT CTGGGCCCGC GAAGGGGGGG GCGAAAAGAT GGTGGTGAGC AAGCAGTTTC TGCAGCGCCT GGCCAAGCAG AAGCTCTCAG GCTTCTTCCT GAGCCGCGAC CGCGCCTACG ACAAGGCGGA GATCAAGGCG ACGCTGGAGC AGGGGGAGCT TACCTTCAAC GCGCTGCAGA TCCTGAACAC CAACGCCCTC GGAATCAAGG ACCTGAACGT CAACATCGCC CCGACGCAGA ACCGGATCGC CCTGGACCAC CTGCTGGAGT CGATAAAGGA GGCGGCGGTG CGCGGCGTGC CGGCCACCGG CGGAGAGGCC CCGGCGAAGA AGCCGCAGCA GGAACCGGCG CCCGAGTTCA AGTGGGAGGA GTGA
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Protein sequence | MSEPEKKEKD LKKNASIAFL VAASALGLVL LCLVAFRIYL ATSYPASQLS RLVTDRLQQE FTVKEIDLSG RTLVLKGVRL KNPAGFASGE LFSADRVVIA PRWIQLLWGR QRFELIDVEG GKLALEKDAH GTWNFAGIQR RLAARRPPGK AAPETVIGKL LVKNSSITIQ GEGVHGINLQ VFNLASGGSR SAQVELAFED GARNRYLLTG TARPGADAAV DLSLKAPSIS LKNLASLFKL KDPEPFQDAQ GALQASAVLA KGELKSTGSF SFRRVLIPAA RGDYPIAGLL QFNGVYSLSE DTAHLDEATL TIDKMARLQA GGTVTGVKKE RVFDLLVSMD AVDLALINVL LPEESRHDLN FGGRLRCESL RLEGNGRAGI ESVVGNLQLR DGLLAREKDL IAAGVAGDLA LSRRGATVSA RGKFSLPRPE PKALVQALEL PVEFTLSAGL KPLRARSEAL SARVMGVAVS GSVAYDVGSS EPLRADLAFA TREPERLNPW LSRYGMEALS GTGTGSVQLA GKGAKELSAS ARLMVANLQG KQGKDNIGVK AGTATATVKK RGEKLQVHGD ARLAAISFQG KNGDARFAYR VADRYLYLNG VQASWGETRF SATSLSGELP GATVTGQLTR RPLRFDLEGG ALGQGNLQLS GIAGRVRGSL VGEGKDKWLD GSADLASRAL SWRNAAMAAP VLHAVFARQG GRAELNGQLL GGKVAGKAAF RPFAPGAPSS FNVSITGAAA KEISRLAAGE AGTRPSAGTV DLKLEGTNAG KSGLSCRFDA RGRDLTLANA TGKTLVSGAA ASVKGRLSGG TLTIDEGTVM PGRGVTLTAR GEIADALSDK RRGTLLLALP DTSLNDLVES LINLAPPLIQ EATVKGSVAA EGRIELREGR KILNGGVTVR GGRVEAPAQK FLVADLNGRI PLSLDFGGKG SAAPRAAGEF SRENYPRVLA QLRATPPGGD LLTVEKIGFG SVQTGKLSVQ LRAQNGLTEI TSLRTTLYDG TVLGKGHLLF AGEATYRGDL LVNGLSMKAL CRSLPNLEGY ISGRVDGVIS VHGIGGDQKR LTGFVDLWAR EGGGEKMVVS KQFLQRLAKQ KLSGFFLSRD RAYDKAEIKA TLEQGELTFN ALQILNTNAL GIKDLNVNIA PTQNRIALDH LLESIKEAAV RGVPATGGEA PAKKPQQEPA PEFKWEE
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