| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3742 |
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| Symbol | |
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| ID | 6780606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 4275990 |
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| End bp | 4277759 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642769737 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002140530 |
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| Protein GI | 197120103 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGTTACC AGGAAAGCGC AGAGAACCAG GCGCGGCTCA AGTACGTGGA GCTGCTGCTC
AAGAAGGGGA TGCAGGAGGA AGCCCGCACC CAACTGCAGC AGCTGGTGCA GGAAGATCCA
GGCTGCGCGC GGGGCTGGTA CCTCCTCGCC GTGCTGGTGG GGGAGCAGGG GTTCCCGGAC
CAGGCGGCGA AGCTACTGAG GCAGGCGCTT AGGGCCGAGC CGGAGAACGT CAAGGCGCTG
AACGCCCTCG GGGTGGCCCT GCAGCAGATG GGGGAGCGGG ACCAGGGCGC GGCATGCTAC
GGTGAGGCGC TCCGCATCGA TTCCCGGTTC CAGGAGGCGC GGGTGAACCT CGCCCTGCTC
CTCAAGGAAG GGATGAGGCT TGCCGAGGCT GAGGCGCTTC TGTCCCAGGG GATCGCGCTG
GAGCCCGAAT CGGTGCGGCT TCGTTACAAC TACGCCAACG TGCTCCATTA CCAGGGGAGA
AGCCTGGAGG CGACCGGCGC CTACCGGGAG GTGCTCCGCC TGGACCCGCA GCACCTGGAT
GCACGGCAGA ACCTACTGTT CACGCTGCAC TACTCTCCGC AGTTCTCCGA CCGGCAGATC
TTCGCCGAGC ACCTGCGCGC CGCGAGAAGC GCCCCCCTCC GCCTCCCCTC CTCCCCTTCC
GTCCCGCGCC GAGGCAGGCG CATCAGGATC GGCTACCTCT CCCCCGACTT CCGCAGCCAC
GCCGTCGCCT CCTTCATCGA GCCGGTCTTG AAGAAACACG ACCGGGAACG CTTCGAGATC
TTCTGCTACG CGAACCTTCC CCGCCCGGAC CGGGTCACCG AGAGGATAAA GGGGTTGTGC
GAGCACTGGC GCGACCTGTA CAACATACCG GACCAGATCG CGGCACTGAT GATCGCCGCC
GACGCCCTCG ACGTCCTGAT CGACCTAGCC GGCCACACCT CGGGGAACCG GCTCCCGCTT
TTCGCCCGCA AGCCCGCTCC CCTGCAGATC ACCTGGATCG GCTACCCAGA CACCACGGGG
CTCAAGCAGA TGGACTACCG GATCACCGAC CGCCACGCCG ACCCTCCCGG GAAAAGCGAG
CGCTACCACA CCGAAGCACT GCTCAGGCTC CCGCGCAGCT TCAGCTGCTT CCTCCCGCCG
GCAGACGCCC CCGAAGTGGC GCCTCCCCCG TGTCTTGCCA CAGGCGCCGT CACCTTCGGC
TCGTTCAACA ACCTGGCCAA GGTCACCCCC GAGGTGATCG CCCTCTGGTG CCGGGTGCTC
CATGCCGTCC CAGGATCGCG CCTGCTCTTG AAGGGGAGGC CGTTCGAGGA CAGCGGGGTG
CGGGAGAGGA TCGCCTCACA GTTCTCCACG GGAGGGATAG GGGGTGAAAG AATCGAGCTG
AACCCGGGAG AGCCGGAGAG CTCGGCGCAC CTGGCGCAGT ACGGGCGGGT CGACATCGCC
CTCGACACCT TCCCCTACAA CGGCACCACT ACCACCTGCG AGGCGCTCTG GATGGGCGTC
CCGGTGGTGA CTCTGGCGGG TACGAGGCAC GCGGCGCGGA CCGGGGCGAG CATCCTCGCC
AACTGCGGGC TCGACGAGCT GGTGGCCGAG AACGAGGAGG AATACCTGGA GATCGCCCGG
CGGATGGCGG CGGATCGGGA AAGGCTTTTG GAGTTGAGGA TGGGGGCGCG GGAAAGGCTC
TCGGCATCGC CGCTTCTGGA CGCGGCGGGG GTGACGCGGG AGTTGGAAGC GGCGCTGGAG
GGGATCCTCA AGGAGCGCGG GGTACGTTAG
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| Protein sequence | MGYQESAENQ ARLKYVELLL KKGMQEEART QLQQLVQEDP GCARGWYLLA VLVGEQGFPD
QAAKLLRQAL RAEPENVKAL NALGVALQQM GERDQGAACY GEALRIDSRF QEARVNLALL
LKEGMRLAEA EALLSQGIAL EPESVRLRYN YANVLHYQGR SLEATGAYRE VLRLDPQHLD
ARQNLLFTLH YSPQFSDRQI FAEHLRAARS APLRLPSSPS VPRRGRRIRI GYLSPDFRSH
AVASFIEPVL KKHDRERFEI FCYANLPRPD RVTERIKGLC EHWRDLYNIP DQIAALMIAA
DALDVLIDLA GHTSGNRLPL FARKPAPLQI TWIGYPDTTG LKQMDYRITD RHADPPGKSE
RYHTEALLRL PRSFSCFLPP ADAPEVAPPP CLATGAVTFG SFNNLAKVTP EVIALWCRVL
HAVPGSRLLL KGRPFEDSGV RERIASQFST GGIGGERIEL NPGEPESSAH LAQYGRVDIA
LDTFPYNGTT TTCEALWMGV PVVTLAGTRH AARTGASILA NCGLDELVAE NEEEYLEIAR
RMAADRERLL ELRMGARERL SASPLLDAAG VTRELEAALE GILKERGVR
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