Gene Gbem_3713 details

Gene Information

• Locus tag: Gbem_3713
• Symbol: rho
• ID: 6780577
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: -
• Start bp: 4237047
• End bp: 4238294
• Gene Length: 1248 bp
• Protein Length: 415 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 642769708
• Product: transcription termination factor Rho
• Protein accession: YP_002140501
• Protein GI: 197120074
• COG category: [K] Transcription
• COG ID: [COG1158] Transcription termination factor
• TIGRFAM ID: [TIGR00767] transcription termination factor Rho

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000000184202
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCTAC AGGAACTTAA AGAAAAGAAG ATCAACGATC TCACTGCGAT TGCCAAGGGG 
CTCAACATCG AGGGGGCTTC CAGTCTCAGG AAGCAGGACC TGATCTTCGC CATTCTCAAT 
GCCCAGACTG AGAAGAACGG GATGATCTTC GGCGAGGGCG TTCTGGAGAC GCTCCCTGAC 
GGTTTTGGCT TCCTGAGGGC GCCGGACTAC AACTACCTGC CGGGGCCGGA CGACATCTAC 
GTCTCGCCGT CGCAGATCCG CCGCTTTAAC CTGCACACCG GCGACACGGT GGCGGGCCAG 
ATCAGGCCTC CCAAGGAAGG GGAGCGCTAC TTCGCCCTGT TGAAGGTCGA GACGGTGAAC 
CACGAGTCCC CTGAGGTTGC GCGCGACAAG ATCCTGTTCG ACAACCTGAC TCCTCTCTAT 
CCGCAGGAAA AGCTGAAGCT CGAGACCACC CATGACAATA TGTCGACCCG GGTCATGGAG 
CTGATCGCGC CGATCGGCAA GGGGCAGAGG GGGCTCATCG TGGCGCCGCC CAGGACCGGC 
AAGACCATGC TGATCCAGAA CATCGCCAAC TCCATCGCCA TGAACCACCC CGAGGTGTTC 
CTGATCGTCC TTCTGATCGA CGAAAGGCCC GAGGAGGTGA CCGACATGCA GCGCTCGGTG 
AAGGGCGAGG TGATCTCCTC CACCTTCGAC GAGCCGGCCT CGCGCCACAT CCAGGTGGCC 
GAGATGGTCA TCGAGAAGGC CAAGCGGCTG GTCGAGCACA AGCGCGACGT CGTCATCCTG 
CTCGACTCCA TCACCCGCCT GGCCCGCGCC TACAACACCG TGATCCCGCC TTCCGGCAAG 
ATCCTCTCCG GCGGCGTCGA CTCCAACGCC CTGCATAAGC CCAAGCGCTT CTTCGGCGCG 
GCCAGGAACA TCGAGGAAGG GGGCTCCTTA ACCATCATCG CCACCGCGCT CGTCGACACC 
GGCTCCAAGA TGGACGAGGT CATCTTCGAA GAATTCAAGG GCACCGGCAA CATGGAGCTC 
CACCTGGACC GCAAGCTGGT CGAGAAGAGG ACCTTCCCCG CCATCGACAT CAACAAATCC 
GGCACCAGGA AGGAAGAACT CCTGATCGAC AAGGCGTCCC TGAACCGGAT CTGGATCCTC 
AGGAAGGTGC TGCATCCCAT GAACGTGGTC GACTCCATGG AGTTCCTGAT CTCCAAATTG 
CAGGGGACCA AGAGCAATCA GGACTTCCTC GATTCGATGA GCAAGTAA 

 

Protein sequence

MNLQELKEKK INDLTAIAKG LNIEGASSLR KQDLIFAILN AQTEKNGMIF GEGVLETLPD 
GFGFLRAPDY NYLPGPDDIY VSPSQIRRFN LHTGDTVAGQ IRPPKEGERY FALLKVETVN 
HESPEVARDK ILFDNLTPLY PQEKLKLETT HDNMSTRVME LIAPIGKGQR GLIVAPPRTG 
KTMLIQNIAN SIAMNHPEVF LIVLLIDERP EEVTDMQRSV KGEVISSTFD EPASRHIQVA 
EMVIEKAKRL VEHKRDVVIL LDSITRLARA YNTVIPPSGK ILSGGVDSNA LHKPKRFFGA 
ARNIEEGGSL TIIATALVDT GSKMDEVIFE EFKGTGNMEL HLDRKLVEKR TFPAIDINKS 
GTRKEELLID KASLNRIWIL RKVLHPMNVV DSMEFLISKL QGTKSNQDFL DSMSK