Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3597 |
Symbol | |
ID | 6780461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 4113896 |
End bp | 4115671 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642769592 |
Product | flavocytochrome c |
Protein accession | YP_002140385 |
Protein GI | 197119958 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACTTT CGAGGTTCGG CTTTTTGATG GCGGCAATGA TGGTGGTGGC GTCGGCGACG GCACTGTGGG GCGGTAACGC GGAGAATCTG GCAAAAGCCC ACGTGGGCAA AGCGACTTGT GCCGACTGCC ACGGCAGCGC GAAGAAGGTC GTGGTGGATG ACTCGGAAGC CGCCGTGAAC GCCAAGTGCA TCAATTGCCA CGGAACGCTG GCCGAATTGG GGAAGAATTC CCACGAAGAG GTTAACCCCC ATAAGTCGCA CCTGGGAGAG ATTAACTGTA CCGCCTGCCA TCATGGCCAC ACGGCTTCGT GGGCTTACTG TATGAACTGC CATGCTTTCG ATATGAAGAT TCCCGGTGGC GGGGCGACGG CTCACAAGTC CGCCGCGCCT GTTTCGACCG CCAAACGTAA ACCGGTCAAG CGCACCGAAC AGGCCGACGT TGTGGTCATA GGCGCCGGCG CGGCAGGCTT TACCGCGGCC ATCACCGCGC ATGATGCCGG CGCCAAGGTG GTCATTATCG AGAAGCAGCC CATCACCGGC GGCAACAGCA TGCTGGCGGC CGGCGGCATG AACGCCGCTG AGACGTCGGT CCAGAAGGAA AAGGGAATCG CCGACTCCGT CGACCTCATG TACAAGGACA CCATGACCGG AGGGGGGAAT CTCAACGATC CGGCCCTAGC CATGGTGCTT GCCAAGAATT CCGCCTCGTC CGTTGACTGG CTCACCGGGC TCGGCGCCGA CCTGAGCGAC GTAGGGCGCA TGGGGGGCGC CAGCGTCAAC CGCACTCATC GTCCCAAGGG CGGCTCAGCG GTGGGCGCGC AGGTCATCGA CGTTCTACGC AGAAACGCAG CGCAGCGCAA GATCGACACC CGCGTCAACA GCAAGGTGGT CAAAATCGTT GAAGACGGTA AGGGGAGGGT GACCGGAGTC CAGGTGGAAG GAAAACACAG CGGCCTTTAC ACCATCAAGG CAAAGGCCGT GATCATCGCT GCGGGTGGAT TCTCGGCCAA CGCAGAGAAA GTCGCCTACC TTCGACCGGA ATACAAAGGG ATGACCACCT CCAACCAGCC GGGTGCGACC GGCGACGGCA TCGATCTGGG CGCTGCTGCC GGCGCAGAAC TGAAGGACAT GAAGGAGATC CAGATTCATC CCACCGTCGC TGCCGCAAGC CGTACCCTGA TCACCGAGGC GGTGCGCGGC AATGGCGCCA TCCTGGTGAA CCACGAAGGA AAGCGCTTCG TTAACGAATT GACCACCCGC GACAAGGCAT CCGCCGCCAT ATTGGCCCAG TCCGGCAAGT CCGCCTATCT CGTCTTCGAC GAAGGGGTAA GGAAGAGCCT CAAGCAGATC GACGGCTATT TCCATCTGAA CCTTGTGCAG GAAGGGGCCA GCATCCAGGA ACTCGCCGAC AAGATCAAGA TGCCGGCCGG GACGCTGGAG GCGACCATTG CCGCCTACAA TAAGGCGTAC GAGGCGAAGA ACGATCCCGA ATTCAAGCGC GCCGACCTGC CGCGACCGCT TCAAACCGCC AAGTACTACG CCATCGAGGT GAAACCGGGG GTGCATTACA CCATGGGTGG GCTCAAGATC ACCACGGATA GCGAGGTGAT AGCCAAGGAT GGCAAACCGA TCAAGGGGCT TTTCGCCGCA GGAGAGGGTA CTGGCGGGGT TCATGGCAAG AACCGGCTGG GTGGAAACTC CATCTCGCAG ACCATCACCT TCGGCAGGAT AGCGGGGGCA AACGCAGCCA AGGTCGCCAA AACAGCTAGC CGCTAG
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Protein sequence | MRLSRFGFLM AAMMVVASAT ALWGGNAENL AKAHVGKATC ADCHGSAKKV VVDDSEAAVN AKCINCHGTL AELGKNSHEE VNPHKSHLGE INCTACHHGH TASWAYCMNC HAFDMKIPGG GATAHKSAAP VSTAKRKPVK RTEQADVVVI GAGAAGFTAA ITAHDAGAKV VIIEKQPITG GNSMLAAGGM NAAETSVQKE KGIADSVDLM YKDTMTGGGN LNDPALAMVL AKNSASSVDW LTGLGADLSD VGRMGGASVN RTHRPKGGSA VGAQVIDVLR RNAAQRKIDT RVNSKVVKIV EDGKGRVTGV QVEGKHSGLY TIKAKAVIIA AGGFSANAEK VAYLRPEYKG MTTSNQPGAT GDGIDLGAAA GAELKDMKEI QIHPTVAAAS RTLITEAVRG NGAILVNHEG KRFVNELTTR DKASAAILAQ SGKSAYLVFD EGVRKSLKQI DGYFHLNLVQ EGASIQELAD KIKMPAGTLE ATIAAYNKAY EAKNDPEFKR ADLPRPLQTA KYYAIEVKPG VHYTMGGLKI TTDSEVIAKD GKPIKGLFAA GEGTGGVHGK NRLGGNSISQ TITFGRIAGA NAAKVAKTAS R
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