| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3573 |
|---|
| Symbol | |
|---|
| ID | 6780437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 4086991 |
|---|
| End bp | 4088304 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642769568 |
|---|
| Product | acetyl-CoA hydrolase/transferase |
|---|
| Protein accession | YP_002140361 |
|---|
| Protein GI | 197119934 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0427] Acetyl-CoA hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0018283 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGTG TGAAGAAGGC CAAGCAGAAC TACGAGGCGG AGTACCGCCA GAAGCTTTGC
ACCCCTGAAG AGGCGGCATC GGTCGTCAAG TCGGGGGATC ATCTTTGTTT TCCCATCAGC
TGCGGCGAGC CGACCCTCTT CGTGAGGGCG CTCGCAAAGA GGAAGCGTGA GCTGGAAGGG
GTCGTGGTCA ACCAGCAGCA TCACCTTTGC CCTGACTATT TCACCGAGGA CTCCGCGCCC
CACATCAAAG TGAACGCCTG GTTCACCAGC CATGTTTCGC GGCAGGCCGT CCAGGAAGGG
TGGGCTGACT TCGTCCCCAA CTACTTCCAC GAGGTGCCGA AACTGCTGAG GGAGTACTGG
CCCATCGACG TCGCCGGTAC TGTGGTCTCG CCGATGGACG AGCATGGCTA CTTCACCTGC
AGCCTCTCGG TAGCCTACAC GATGGAGGCG GTGAAAAAGG CGAAGAAGGT CGTGCTGCAG
GTGAGCCCCC AGGCGCCGAG GACCCACGGC AACTGTCACA TCCACATCTC GGAGGTCTCC
CACATCATCG AGTGCCACGA GCCGCTCCAG GAGCTGTCGA TCCCCCCCAT CTCCCCGGTC
GAGGAGGCTA TCGGCGGCTA CCTCTCCGAA CTAATCGAAG ACGGTTCCTG CCTGCAGCTC
GGGTGGGGAG GGATTCCCAA CTCCATCTGC AAGGCGCTCC TCAACAAGAA GGACCTCGGC
ATCCACACCG AACTCCTCTC GGACGGGATG GTCGACCTGA TGCTGTCGGG GGCGGTCAAC
AACTCGAAAA AGAAAACCCA CCGCGGCAAG ACCATAGCCA CCTTCGCGCT CGGGACCAAG
CGCCTCTACG AGTTCATGCA CGAGAACCCG CAGATCGAGA TGCATCCGGT GGACTACGTC
AACTACCCGC ACAACATCGG CAAAAACGAC AAGGTGGTTT CCATCAACGC GACCCTCCAG
GTCGACCTCC TCGGCCAGTG CTGCTCGGAA TCGTTCGGTC ACCTCCAGTA CAGCGGGACC
GGCGGCCAGG CGGATTTCGT GCGCGGCTCG AACATCTCCA ACGGCGGCAA GGGGTTCATC
ACCCTCCCTT CCACCGCGAA AGACGGGGCC GTCTCCAGGA TCGTCCCGAC TCTCACCTCG
GGGGCATCGA TCACCACCGG CAAAAACGAC GTCGACTACG TTGCCACGGA GTACGGGGTT
GCAAAGCTGA GGGGGCAGAC TGCCCGGCAG AGGGCGCTCA ACCTGATCAA CATCGCCCAT
CCTGATTTCC GCGAGGAACT CATGGCTGCA GCGAGAAAGA TGAACCGCAT TTAA
|
|---|
| Protein sequence | MNSVKKAKQN YEAEYRQKLC TPEEAASVVK SGDHLCFPIS CGEPTLFVRA LAKRKRELEG
VVVNQQHHLC PDYFTEDSAP HIKVNAWFTS HVSRQAVQEG WADFVPNYFH EVPKLLREYW
PIDVAGTVVS PMDEHGYFTC SLSVAYTMEA VKKAKKVVLQ VSPQAPRTHG NCHIHISEVS
HIIECHEPLQ ELSIPPISPV EEAIGGYLSE LIEDGSCLQL GWGGIPNSIC KALLNKKDLG
IHTELLSDGM VDLMLSGAVN NSKKKTHRGK TIATFALGTK RLYEFMHENP QIEMHPVDYV
NYPHNIGKND KVVSINATLQ VDLLGQCCSE SFGHLQYSGT GGQADFVRGS NISNGGKGFI
TLPSTAKDGA VSRIVPTLTS GASITTGKND VDYVATEYGV AKLRGQTARQ RALNLINIAH
PDFREELMAA ARKMNRI
|
|---|
| |