Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3547 |
Symbol | |
ID | 6780410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 4061394 |
End bp | 4062692 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642769542 |
Product | peptidase M16 domain protein |
Protein accession | YP_002140336 |
Protein GI | 197119909 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAGTT GCACCAAGAA GGTTCTCCCC AATGGATTGC GCCTCGTCTC CGTCGAGATG CCGCATCTGC ACAGCGCGGA GATCGCCATC TACATCAAGG CCGGCGGCCG CAACGACACC CCTGGCAAAG CTGGCATCTC ACACTTTCTG GAGCACATGC TGTTTCGCGG CTCCAGCGAA TTCGCCACCA GTCTTGAGCT CGAAATCGCC TTCGAGGCGA TTGGCGGCAG CGTCAACGCG GCTACCGACG AAGAGACCAC CTGCTACTTC TCCAGGGTCC ATCCGGACCA GGTCCCGGAA GGGATCCGGC TTTTTTCCTC CATGCTCCTT GCTCCTACGC TCGAGGGTAT CGAGATCGAA AAGCGGATCA TCACCGAGGA GGCGCTTGAG GACATCAACG AGCGCGGCGA GGAGACCAAC ACCAGCAACC TCTGCTCGAA GCTCCTTTGG CCCGGGCACC CGCTGGGGAC TCCGACCATA GGGTACCTGG AGAGCATCAA GGGTTTCACC GAGGAGGACC TGCGGGGGTA CCTCCAGGAT CATTACGTGC CGGAAAACGC GGTGATAGTC GCCGCGGGAA GGCATGACGC GCAAACCTTC TTCGCCTCCT GCGAAAAGCA CTTCGCCGGC TGGTCCGGCG CGAAGCCCCC GCTACCGGCG CCGGTGCACG AGCTGCAGGA AGAGCCCCGT TCGGTCTTCG TCAAGGATTC GGACAGCCAG GTGAACCTGC AGATAGCCTT CCGCGGCTTC GCCAGGTACG ACAACCGGAT CATGGCGCTG CGGCTGATGC GCCGCATCCT CTGCGGCGGG GGAAGCTCCA GGCTGCATCT TTCCCTCAGG GAAAAACTGG GGATCGTCTA CTCGGTCGAT GCCTCCCTTT CCGCCTACGA GGAAACAGGC GCCTTCGCCA TCGAGCTTGC CACCGCGCCG GAGAACCTGG TGCTGGCGGT CTCCGAGGTG CTGCACGAGG TGAAGAGCCT CGCTTTCGAG GAGGTCGGGG ACGCGGAACT CTCCAGGGTG AAGGAAGGTT ACTTCTACGA CCTGGAGTAC AGCTCCGATT CCACCTACGA GATGCAGGTA CGCTACGGCT GGGGAGAGCT GATGACCCTG GTGCGTACCA TAGACGAGGA CCGGGCCGAG GTGGCCTCGA TCGCACCGGC GCAGATAAGG GAAACGGCCC GGGTGCTTTT CGATCCCAGT AACCTGACCC TTGCCGCCGT CGGCCCCTGG AAGGCCCCCT CCAGGAAGGT AGTGGAGAAG CTGATTGGGG AGTACCGCAA AGGGTGGGCA AAGGCTTGA
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Protein sequence | MLSCTKKVLP NGLRLVSVEM PHLHSAEIAI YIKAGGRNDT PGKAGISHFL EHMLFRGSSE FATSLELEIA FEAIGGSVNA ATDEETTCYF SRVHPDQVPE GIRLFSSMLL APTLEGIEIE KRIITEEALE DINERGEETN TSNLCSKLLW PGHPLGTPTI GYLESIKGFT EEDLRGYLQD HYVPENAVIV AAGRHDAQTF FASCEKHFAG WSGAKPPLPA PVHELQEEPR SVFVKDSDSQ VNLQIAFRGF ARYDNRIMAL RLMRRILCGG GSSRLHLSLR EKLGIVYSVD ASLSAYEETG AFAIELATAP ENLVLAVSEV LHEVKSLAFE EVGDAELSRV KEGYFYDLEY SSDSTYEMQV RYGWGELMTL VRTIDEDRAE VASIAPAQIR ETARVLFDPS NLTLAAVGPW KAPSRKVVEK LIGEYRKGWA KA
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