Gene Gbem_3525 details

Gene Information

• Locus tag: Gbem_3525
• ID: 6780388
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 4037548
• End bp: 4039464
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642769520
• Product: Ig family protein
• Protein accession: YP_002140314
• Protein GI: 197119887
• TIGRFAM ID: [TIGR00148] UbiD family decarboxylases

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.464381
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAGAA GTTGGTTCAT CATGTTGGCG TTTTGTATGG TCTTTATGTT CAACCTGGCG 
GGATGCGGCG GAGGGAGCAG CAGCGCACCG CAGAAGACGG CCATTTCGGG GACGGTGACC 
TTCCCCTCGG CAAATGGAGC AGCAAAGGTT GCCGCAGCAG CGGCGACCAC TGCGACCGCT 
CCAACCCTGG AAGTCAGGGA CCTCAACGGG ACCCTGATAA AGAGTGTTCC TTTGACCCTC 
CAGACCGGCA CGGTCAACAC CTACAGCTAT CCGGCAATAG AGGTGGAACC AGGCAAGGAC 
TACGTCCTCA AAGCTGTCGA CGGCCAAAGG GTGCTGCGCG CCCTGGTGGA CAAGGCAGCC 
CTGTCCGGCG CGTCCGCAAC GAAGAACGTC AACAACGTCA CGACGACTGC GCTCATCGTG 
GTGGAAAAGG CGCTCAATCT GACCGCAGGG ACCCTGGGCG CGACGGCTAC GGCGGCCCAG 
GTGCAGACTG CATCGGCCGC CCTGGCCCTG ACCTCCCCCC CGGCAACCAT CGAGAGCAAC 
ATAACCGCGG CGATAGCCGC ATGCACCTCG GCTACGGGGA CCGCGAATGC GGCTCAAGCG 
CAGCTTGCTT CCCTTGCCAG CATTGTGACC GCTGCCGTCA GCAGCAATGT AGATCCCAGC 
GCCTTCGTGG CAGGCACTTC AACCGCCACT GCGGTCGACG CGGTCACCTA CACGGTTTCC 
GGCAGCACCG CCACCGCCAG CTCCGCCCCG GTCTCCAGCA ATATCGCCGG CACCTTCGTC 
ACAGTTGCAG CCGAGATCCT GCCGAGCATT TCCAGCGCCG GCGCCACGTC CTTCACGGTC 
GGTTCCGCCG GCAGCTTCGC CATCACCGGG ACCGGCACCA TGAGCGTCTC GGGCACGCTC 
CCTTCGGGCG TCACCTTTGA CGCCGCCACG GGGCGTCTGA GCGGCACGCC GGCCGCGGGA 
AGCACCGGGG CCTACCTGCT CACGGTCACC GCCACCAGCA ACAGCCTCAC CGCGACCCAA 
AAATTCACCC TTACCGTCAA CCCGATCCCC TCGTCCCTCG CCTTCACCAC AGCCATGCTC 
TCCGGGAAGA CCTTCACCGA GGGGACCTCG AACACCCTGG TGTTCAACGC AAACGGAACG 
CTCACCGCAA GCGACACCAA GGACGCCTTG ACCTGGAGCG TCAACTCCGC CGGGCAGGTC 
GTGGTGCACA ACACCGTCAC CAACATCAAC ACCACAGTCA CCGCGCTCTC CGGCAGCATC 
TCCACCGGCC TGGCGGTTTC CTTGGCCCAC TCCGACGGCA CGACCGAATC CACCACGCTC 
ACCCTCTATG TGCCGCCTGC TCAAACCACC GGCTTCACCG CGGCCATGCT TTCCGGCAAG 
ACCTTCATCG AGGGGACCGT GAACACCCTG GTGTTCAACG CCAACGGAAC GCTCATCGCA 
AGCGACACCC CGGACGCCTT GACCTGGAGC GTCAATTCCT CCGGCCAGGT CGTGGTACAC 
AATTCCGTCA CCAATATCAG CACCACGGTC ACCGCGCTTT CCGGCAACCT TTCCACCGGC 
TTGGCAGTTT CCCTGGTTGA CTCCAATGGC CCGACCGCAT CCACGACGTT GACCCTGTAT 
GTGGCCCCCA CCCCGGTTAC CGCCTTCACC ACCGCCATGC TTTCCGGCAA GACCTTCACC 
GAAGGGACCG TTAACACGCT GGCGTTCAAC GCGAACGGAA CACTGGTGGC AAGCGACACC 
ACGGATGCCT TAACCTGGAG CGTCAACTCC TCCGGTCAGC TCGTGGTGCA CAATTCCGTC 
ACCAACATCA ACACCACGGC CACTGTGGTT TCCGGCAACC TTACCACCGG CTTGACCGTT 
TCCCTGGTGG ATTCCAATGG CCCAACCGCA TCCACCACCT TCACCCTGCG GCCGTAA 

 

Protein sequence

MRRSWFIMLA FCMVFMFNLA GCGGGSSSAP QKTAISGTVT FPSANGAAKV AAAAATTATA 
PTLEVRDLNG TLIKSVPLTL QTGTVNTYSY PAIEVEPGKD YVLKAVDGQR VLRALVDKAA 
LSGASATKNV NNVTTTALIV VEKALNLTAG TLGATATAAQ VQTASAALAL TSPPATIESN 
ITAAIAACTS ATGTANAAQA QLASLASIVT AAVSSNVDPS AFVAGTSTAT AVDAVTYTVS 
GSTATASSAP VSSNIAGTFV TVAAEILPSI SSAGATSFTV GSAGSFAITG TGTMSVSGTL 
PSGVTFDAAT GRLSGTPAAG STGAYLLTVT ATSNSLTATQ KFTLTVNPIP SSLAFTTAML 
SGKTFTEGTS NTLVFNANGT LTASDTKDAL TWSVNSAGQV VVHNTVTNIN TTVTALSGSI 
STGLAVSLAH SDGTTESTTL TLYVPPAQTT GFTAAMLSGK TFIEGTVNTL VFNANGTLIA 
SDTPDALTWS VNSSGQVVVH NSVTNISTTV TALSGNLSTG LAVSLVDSNG PTASTTLTLY 
VAPTPVTAFT TAMLSGKTFT EGTVNTLAFN ANGTLVASDT TDALTWSVNS SGQLVVHNSV 
TNINTTATVV SGNLTTGLTV SLVDSNGPTA STTFTLRP