Gene Gbem_3433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3433 
Symbol 
ID6780295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3945156 
End bp3945743 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content65% 
IMG OID642769427 
ProductSirA family protein 
Protein accessionYP_002140222 
Protein GI197119795 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0425] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID[TIGR03527] selenium metabolism protein YedF 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000787487 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGCT TGGATGTCAG GGGAATGGCC TGCCCGTTGC CGGTCGTGTC GGTGAAAAGG 
GCGCTTGAGT CGGCGGAGGG GGAACTGCGT GTGCTCCTAG ACGACGGGGC GCCCAGGGAG
AACGTGAAGC GCTTCGTGCA GGGACGCGGC TACCAGGTAC AGGAAGAACA ACTGGAAGAC
GGTTTCGCCC TCACCGTTTC CGGGACCGGC TCCGGCGCCG CCAAGCGGGA AGCTGCTCCC
GCCGAGCGCA GCGGCGCTAC CGTGATGCTG ATCGGAAGCG ACCGGCTGGG CGACGGCGCG
GAAGAGCTGG GGCGGCTGTT GATGAAGAAC TTCATCATTA CGCTCCTCGA CATGACCGAG
CTTCCGGACC GCATCTTCTT CCTCAACAGC GGCGTGCTCC TGGTCGCGCA GGGGTCCGAA
GTGATCGAGG CGCTTGTGGA GCTGGGGAAC CGCGGGGTGG AGGTGCTCTC CTGCGGCATC
TGCCTCGACT TCTACAAGAA GAAGGAACTG CTGGCGGCGG GCGGCGTGAC CAACATGTTC
ACCATCGCCG AAAGCATGCT GCAGGCGCGC TCGGTGGTGC GGCTGTAG
 
Protein sequence
MNSLDVRGMA CPLPVVSVKR ALESAEGELR VLLDDGAPRE NVKRFVQGRG YQVQEEQLED 
GFALTVSGTG SGAAKREAAP AERSGATVML IGSDRLGDGA EELGRLLMKN FIITLLDMTE
LPDRIFFLNS GVLLVAQGSE VIEALVELGN RGVEVLSCGI CLDFYKKKEL LAAGGVTNMF
TIAESMLQAR SVVRL