Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3392 |
Symbol | |
ID | 6780250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3900442 |
End bp | 3902133 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642769383 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_002140183 |
Protein GI | 197119756 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000826486 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTTCC GAAAGTATCT TTCTTCACTG CGCAGTACGT ATATCTTCAT GGTCTGCTTC GGGCTTCTGA TGGGAGTCGT TTTCCCTTTC TATTCCTGGC TGTTCTTTGG CGGTAACGCA TTCGCGCCGC TGTACGTCTT TGGCTGCATC GCCGCGGGTT TCATCGTTGG CAGTTTTTGC TACCAGATCA TAAAGGAAGC GCTGAGGGTA TACGTCGAGC ATCAGCTGCA AACACTTTAT AAAATTACCA ACGATGCGTC CGCAAAGGTC GATCTCGGCA AGGGAGACGA GCTAAAGCGA CTGATGGAGT GTAACGAGGC ACTGATGAAC AGGGTGCTGG TAATGGTGGA AAACGTGTCA TGCCTCGCTG CCGACATATC GGACAGACAG GGGCGCCTTA CTTCCGACTT CAGCAGGACC GTGGACAACA ACGTCCAGCA AGCCGCCAAA GAGAAAGAGA CGATCAGAGC CATCGATGAC ATGAACGCCT TCTTTAAGGA CCTGCTTCGG GAAATCAGAG ACATCGCCTC CCGGACCGAT GAACGCGCTT CCATTTCAAC TCAAATGAGT GCAGCCACGG ACGCCATTGC CCTCAGCATC CAGGAGTATT CCGCATCGGT CATGGAAACT TCAGGTTCGA TCGAAGAAAT GGCGGCAAGC ATCAAAGGTA CTTCCGCAAA CATAGAGGCT CTCACTACAT CGACAGAGCA GACCTTTAAC TCAATCAATG GGATTGGCGA CTCCATTGTG GGTATTCGTG ACAGCGCCCG TCGCACTTCT GACTGCTCGG ACAAGGTTCG TGTCCAGGCC GTTGAAGGCA TGGCTGCCAT GGCTGCTACC ATTGCGGCAA TGGGTGAGAT TGAGGACCAT AGCGACCGAT CCGTGAATGC GATCAAACGG CTCTCCTCTC ATTCATTGCG GGTGGGCGAG TTCCTTGATG TGATTAAGGA AGTCGTCTCA CAGACGAACC TTCTGTCCTT AAATGCATCT ATCATCGCAG CTCAGGCTGG CGACCGTGGC AAGGCGTTCG CGGTGGTAGC CGAGGAAGTG CGCGGTCTTG CACAGAGAAC CTCTGCTTCG ACTGAGGAAA TCGAAGAACT GGTCCTCAAC ATTCAGAAAG AGACAGTGGC GGCGGAATCA GCGGCGCGAT TGGGCAAGGA AAAAGTAGCC GAAGGTGTCA AGGTATCGGA AAAGGCCGAT GCAGCTTTGC ACAGGATAGA AGAAAGTGCG GCGGAGGCTT CGAGAATGGT GCAGCAGATT GCCGCGGCCA CCGATGAGCA GGCGTCCGGA AGCAGGTTGA TTACCGAGGA GGCCGAGAAG AACCTTTCGC GCGTGAAGCA GTTCAGTCGC GCCATTCAAG AGGAGGAGGC CGGCGCCCAG CTCATCGTTC GCAGCCTGGA CCGGATGCGT GGCTTGTCTG AGAAGATTAC CCTCTCTACC GACGAGCAGG CACGCGGCAA CCGGCTCTAT CTGATGAGCG TGCAGGACGA CAATGACAAG GTCAAAAGGT TGAAAGAGAC TTGCATGGAA CAGATTGCCA TAGGCGAGAT GCTGCGCAAT GAAGTAGCAG AGGTCGACCA ACTCATAGAG GGCACCGCTG AAGAAGCCAA GCAAATGCTT GGAGAAATCG AGACGATCAA CAACCTGATA AACGACATGC ATCGTGAAAT GGAGAGCTTC AGGAAGTTGT AA
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Protein sequence | MFFRKYLSSL RSTYIFMVCF GLLMGVVFPF YSWLFFGGNA FAPLYVFGCI AAGFIVGSFC YQIIKEALRV YVEHQLQTLY KITNDASAKV DLGKGDELKR LMECNEALMN RVLVMVENVS CLAADISDRQ GRLTSDFSRT VDNNVQQAAK EKETIRAIDD MNAFFKDLLR EIRDIASRTD ERASISTQMS AATDAIALSI QEYSASVMET SGSIEEMAAS IKGTSANIEA LTTSTEQTFN SINGIGDSIV GIRDSARRTS DCSDKVRVQA VEGMAAMAAT IAAMGEIEDH SDRSVNAIKR LSSHSLRVGE FLDVIKEVVS QTNLLSLNAS IIAAQAGDRG KAFAVVAEEV RGLAQRTSAS TEEIEELVLN IQKETVAAES AARLGKEKVA EGVKVSEKAD AALHRIEESA AEASRMVQQI AAATDEQASG SRLITEEAEK NLSRVKQFSR AIQEEEAGAQ LIVRSLDRMR GLSEKITLST DEQARGNRLY LMSVQDDNDK VKRLKETCME QIAIGEMLRN EVAEVDQLIE GTAEEAKQML GEIETINNLI NDMHREMESF RKL
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