Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3354 |
Symbol | |
ID | 6780212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 3853851 |
End bp | 3855686 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642769345 |
Product | hypothetical protein |
Protein accession | YP_002140145 |
Protein GI | 197119718 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00026659 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGCTAA AAAGTCTCCT TTTCCTCTTC CTTGTTCCGG TGCTGGTCGC CGGTTGCGGC GGCGGCACCA GCGACAACGG GGTCCCCATT TCCAAGCTGG CGGCCTCGCA GGGGTGCATG AACCTAAGCT GCCACGGCAC CATGACCTCC CCGGGGACCG GGGCCGTCAT CGCCGACGAA TGGCGTGCTT CCGCCCACAA CTTGAAAAAC GGGGCCGGAT GCGCCGACTG CCACGAACCG GACGCGGGAC ACCCCAACAC CTGCAGCAAG TGCCACGGCG GCGGAGGCTT CGGCGTGACC AAGAACCCGG ACCAGGCTGG CAAGTGCGGC AAGTGCCACG GGCTCTCCCA TCCGGGCGAC GTCATGGTGG CGCGGGCGCC GCAACACTTC GGCAACATGA CCGCGAGCCT TGCCAACAAC AAGTACCGCG CTTCCTATGT AAGCTCCAAC TACGTGGGGA ACTGCCGTGC CTGCCACAAC CCCCACGATC CCAGCTCCGC AATGAACGTG AACCGCGACT GGGCCGCTTC CGGCCATGCC GACGTCCTCG CCGGGGCGAG GACCGGGTAC GATTTCAAGA CGCGCGGCAG CTACCAGCCC GCCAGCACCA CCTTCCAGTA CTACTGCGTC CGCTGCCACA CCTCGACCGG CTACGTGAAG TTCGTGACCA GCGCCTTCCA GGACGTCCGT CCCTTCGCCG GGCCGGGGTA CGAGGTGGTG CAGAATTATC CGCGCACCGT CGCTGCGGGT GCCGCGCAGC CGGCGGACAC CCCCTCCCCG GACAAGACCA AAGAGGTCAC CGCTTGCAAC GTCTGCCACG ACAACGGCGC AGGCCGTGCC TACAGCTGGG CCAGGCGCGC GGTGCCGCCG GTGACGATCT ACTACAACTT CTCCTCTTCG AACAGCTCGC CCACGGTGAA GCTGAACAAC AAAGCGACCT CCTACCCCAA CGTCGGCCCC TCGAACATCT GCCTTCCCTG CCACACCGGT CGCGGCATAG GGGCCATGAT CTACGACGCC GTCGCCGCAG GGATCGATTT CAGCAACACC AATAGCCCCG GCGCGCATGA CTTCGCCGCC GGCGCCGTCC TCTTCAGAAA AGGGGGGTAC GAGTTCGCGG GACGAGACTA CGTGCCGACC TACTTCCTTC ACGACAAAAT CGGCGTCGCC AACGAACACG GCACCGGGAA CGACGGCCCC TGCGTCGCCT GCCACATGAA CTCCGGCAAC AGCCACTTCT TCATGCCGGT GGCTTTCGAC GGCACCGGTA AAATCGCCGA GATAACCAGC CGGACCTGCG CGCAGTGCCA CGTCGGCCAA TACGCGCTGA GCCCGGCCAT CCTGCAGACC GAGAAAGAAG GTTTCGCCGC GGCGATCGCC ATGCTCAACG TGCTGAAGAC CGACGCGACG CTGCCGGTCG ACCCGCTGAA CCCGACGCGC TCGAAGGTGC GCCCCCTGGC GAACAAGAAC TCGGATTACA ACGCCGCCTT CCCCGGGGGA GGCGCCAACA CAATGGGAGC CTTCTTCAAC TCGGGGCTGC TCCAAAACGA TCCCGGCGCC TTCGCCCACA ACCGGGTCTA CACCAAGCGG CTCATTTATG ATTCCATCGA CTGGCTCAGC AACGGCGCCC TCGACGGCGA CGTGGAAAGC GCCATCAACA ACGCCACGCT CGCGGTAAAC AGCAAGACCG GGAAGGTGTC GCTCAGCAAC CCGATCCTGG GCGGGTTCTA CATCCCCGAG CAGGTAGACG GCCCGGCCTA CGCCGCCGCC TTCGCCAAGG TAAAGGCAGA CGCAATTAAG TACCTCTTGG GCGCACCGGG CGGAGCGCGC CCCTAG
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Protein sequence | MRLKSLLFLF LVPVLVAGCG GGTSDNGVPI SKLAASQGCM NLSCHGTMTS PGTGAVIADE WRASAHNLKN GAGCADCHEP DAGHPNTCSK CHGGGGFGVT KNPDQAGKCG KCHGLSHPGD VMVARAPQHF GNMTASLANN KYRASYVSSN YVGNCRACHN PHDPSSAMNV NRDWAASGHA DVLAGARTGY DFKTRGSYQP ASTTFQYYCV RCHTSTGYVK FVTSAFQDVR PFAGPGYEVV QNYPRTVAAG AAQPADTPSP DKTKEVTACN VCHDNGAGRA YSWARRAVPP VTIYYNFSSS NSSPTVKLNN KATSYPNVGP SNICLPCHTG RGIGAMIYDA VAAGIDFSNT NSPGAHDFAA GAVLFRKGGY EFAGRDYVPT YFLHDKIGVA NEHGTGNDGP CVACHMNSGN SHFFMPVAFD GTGKIAEITS RTCAQCHVGQ YALSPAILQT EKEGFAAAIA MLNVLKTDAT LPVDPLNPTR SKVRPLANKN SDYNAAFPGG GANTMGAFFN SGLLQNDPGA FAHNRVYTKR LIYDSIDWLS NGALDGDVES AINNATLAVN SKTGKVSLSN PILGGFYIPE QVDGPAYAAA FAKVKADAIK YLLGAPGGAR P
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