| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3327 |
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| Symbol | |
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| ID | 6780185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3822574 |
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| End bp | 3824310 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642769319 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_002140119 |
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| Protein GI | 197119692 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTCTC TAGCTGTTAG GCTCAAAAGC TGTATCTGGA GGATAGACGA CCAGGGCATG
GAAATGCCCC TCTTCCGGCT GCTCTGTCTG CTTGCGACCG CCATCTGTTT TCTGGTCATC
ATCCCGACCA ACTACCTGCA TCACCGCCCC GCCGAGATAA ACGCCGCCGT CTTCTGCTTT
GGCCTCGGCA CGCTCTGGCT CTTCCGCCGG GCCTGCCTGG GAAAGCACCA CCTTAAGACC
TTCTTCTTCC TGCTGCTTTT CCTGCTGAAC CTGGTCTGGT TCCCAAGCGG CGGCACCAGC
GGGAGCTCTG GCTACTTCTT TTACTGCCTC TTCCTCTACG CTCCCATTTT TTACCGGGGA
AAGACACGCT GGCTGCTCCT TGTTCTTGCC GTTGCCGACG CGCTGGTCCT TTTGGCGGCG
GAGATCGCTT TCCCGGGCTC TGTCACCTAC TACGGAGTCG CATATGAAAG GAGTGAGGAT
CTGGCCGTCG GGCTGGTGAT GAGCGCGTTT TGCTGTTCCA TGATGTTGTG GCTGCTCTTG
GAGCAGCACG ACCGCGAGCA GCAGCGGCTT TTGTCGCTGA ACCAGGAGCT GCGCATGAGC
ATGGACGACC GGGCCTGCGT CGAGAGCTCG ATGCTGCAAG ATCGCGAGCT GCTGCACGCG
GTGATCGATG GGACGACGGA CGCGGTTTTC GTGAAGAACC TGCAGGGGCA GTACCTCCTC
TTCAACCGTG CCGCCGAGGT CATGACCGGG GTAAGCGCGG GCACGGCCCT GGGACACGAC
GATCTCGCCG TTTTCTCTCC GGATGTGGCG CGCAATGCGA TGGCGAAGGA CCGGCTCGTC
CTGGATACGC GCGAGCCCCA GACTCTCGAG CTCCATACCC TCGCCCCCGA TGGGGAAGAG
AGGATCTTCG AGGCGATCAA GGGCCCGCTG CAAGACGGCA AGGGTAATTT GATAGGCGTC
TTCGGGATCT CCAGGGACGT CACCGACAGG CGCCGCATGG CGCAGGAACT CAGGATGCTG
AACGAGGAAC TGGAGCTGCG CGTGGTCGAG CGGACGGCAC GATTGGAGAC CGCCATGCGG
GAGCAGGAGA GCTTCAGCTA TTCGGTGTCC CACGACCTGC GCGGTCCGTT GCGCCACATA
AACAGTTACA CGGCGATCAT CGAGGAGGAA TTCGGCGCCG AACTGCCGGC GGAGGCGAAA
AGGTACATGG ACCGCATCCG GAATTCCAGC CGGATCATGG GGGATCTGAT CGACGACTTG
CTGGAGCTCT CCCGGATCGG CAGGTTGGAA TTGAATAAGG TCCCTGTCAG CCTGAGCGAG
CTTGCCGGGT GCATCGGGCG CGAACTGCTG GAGAGCGACC CGGCGCGCCA GGCCGAGCTG
GTGATCGAGC CTGGCCTTCA GGCGCATGGG GACCGGGTGC TTTTGAGGCA GCTTTTGGAG
AACCTGCTCG ACAACGCCTG GAAATATTCC CGGGACAGGG GATGCGCCCA TATCGAAGTC
GGGAAATCGA ACTGGGGGGA GCAAAACGCG TTCTTCGTCC GCGACAACGG GGTGGGGTTC
GACATGACCT ACCAGGACAA GCTGTTCGGG GCCTTCCAGC GCCTGCACGG CTCGGAGTTC
GAGGGGACCG GGATCGGCCT CGCCACCGTG AAGCGGATCG TGGAGCGTCA TGGCGGAACT
GTCTGGGCGC AGGGGGAGGT CGATGCCGGG GCCACCATCT ACTTCACCCT CTCCTGA
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| Protein sequence | MGSLAVRLKS CIWRIDDQGM EMPLFRLLCL LATAICFLVI IPTNYLHHRP AEINAAVFCF
GLGTLWLFRR ACLGKHHLKT FFFLLLFLLN LVWFPSGGTS GSSGYFFYCL FLYAPIFYRG
KTRWLLLVLA VADALVLLAA EIAFPGSVTY YGVAYERSED LAVGLVMSAF CCSMMLWLLL
EQHDREQQRL LSLNQELRMS MDDRACVESS MLQDRELLHA VIDGTTDAVF VKNLQGQYLL
FNRAAEVMTG VSAGTALGHD DLAVFSPDVA RNAMAKDRLV LDTREPQTLE LHTLAPDGEE
RIFEAIKGPL QDGKGNLIGV FGISRDVTDR RRMAQELRML NEELELRVVE RTARLETAMR
EQESFSYSVS HDLRGPLRHI NSYTAIIEEE FGAELPAEAK RYMDRIRNSS RIMGDLIDDL
LELSRIGRLE LNKVPVSLSE LAGCIGRELL ESDPARQAEL VIEPGLQAHG DRVLLRQLLE
NLLDNAWKYS RDRGCAHIEV GKSNWGEQNA FFVRDNGVGF DMTYQDKLFG AFQRLHGSEF
EGTGIGLATV KRIVERHGGT VWAQGEVDAG ATIYFTLS
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