Gene Gbem_3323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3323 
Symbol 
ID6780181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3820127 
End bp3820450 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content61% 
IMG OID642769315 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_002140115 
Protein GI197119688 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00344723 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGCAA ACGGCAGCGA AGAAGGTTAC CTGGAAGTGC TTGAAGGTAT CCGGCGCAAG 
ACGCTGGTCT ACGGCGATGA AACCCTGATG GTGGAGTTCC TGCTGAGCGG GGGGGCGCGT
CTTCCGCTGC ACTCCCACCC GCATGAACAG ACGGGCTACC TGGTGAAAGG GAGGATGAGG
CTTACCATAG GCGGGAATAC ACGCGAGTTG CTGCCGGGCG ACAGCTGGTG CGTGGCGAAG
TGGGAGGAGC ATGGCGCTGA GGTTGTCGAG GACTCGGTTG CGGTCGAGGT CTTCTCTCCG
GTGCGCGAGG ATTACCTCCC CTGA
 
Protein sequence
MFANGSEEGY LEVLEGIRRK TLVYGDETLM VEFLLSGGAR LPLHSHPHEQ TGYLVKGRMR 
LTIGGNTREL LPGDSWCVAK WEEHGAEVVE DSVAVEVFSP VREDYLP