Gene Gbem_3318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3318 
Symbol 
ID6780176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3814475 
End bp3816373 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content64% 
IMG OID642769310 
ProductABC transporter related protein 
Protein accessionYP_002140110 
Protein GI197119683 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTAA TAGACGTAAC TGGGCTTTGT AAAAGCTTTG GTTCCAGGGA GCTTCTGGAC 
CAGGTCGGGT TCGCGGTGGG AGAGGAGGAG AGGGTCGGCC TGATCGGAGC CAACGGCGCC
GGGAAATCGA CGCTGCTCAC CATCCTTGCC GGCATCGAGG ACCACGACGG CGGTTCCATC
GCCATGAAGC GCGGGGCATC CGTCGGCTAC CTGAGCCAGG AACCGGTGCT GGACGAAAGC
TCCACCGTGG CCGCCGAGAT AGAAGGGGGC TTGAAGGAGA TCCGCGCCGC CATGGCCTCC
TTCAACGAAC TCTCCGAGCG CATGGCGTCG AACCCTCCCG ACATGGACCG GCTCCTCTCG
CGCCAGGGGG AGCTCTCCGA CTGGATCGAG CACCACGGCG GCTGGAATAC CGACCACCGT
GTCTCCGAAA TGATGACCCA CCTGCAGTTG CCCGATCGCG ACCAGAAGAT CGGCACGCTT
TCCGGGGGGA CCAAGCGCCG GGTGGCGCTG GCGAAGCTCT TGCTACAGGC CCCGGAACTG
TTGCTCCTCG ACGAGCCGAC CAACCATCTG GACGCCGACA CCACCCAGTG GCTGCAGGAT
CACCTTAAGG CCTACCCAGG CGCCGTGATG CTGATCACCC ACGACCGCTA CTTTCTCGAC
GAGGTGGTGA CCCGGATGCT GGAGCTGGAG CGCGGGGCCG TCATTTCCTA CCAGGGGGGG
TATTCCAGGT ACCTGGAGCA GCGGGAAGAG CGGCTCCTGA ACGAGGCGAC CAGGCGCTCG
CGCCTTTTGA ACCTGCTGCG CACCGAGACC GACTGGATCA GGCGCGGCCC CCCTGCGCGC
TCCACCAAGC AAAAAGCGCG CATCGACCGT TATTACGCCC TTGAGGAGAG CCTGGCGGGG
CCGGCGCGCA AGGAGCTGAA GATCGGCTTT AACACCGAAG AGGGGCTCGG GGGGACCATC
CTGGAGCTGG ACTGTGTGAG CAAGGGGTTC GGCGAGAAGA AGCTGCTCAA GAAGCTCACC
TTCGGGATGA AGCGCGGCGA CCGCGTCGGC GTGATCGGGC CCAACGGCTG CGGCAAGACC
ACCCTGATCC GCATGATCAT GGGGGAGGAG GAGCCGGACC AGGGGAAGGT CGTGGTCGGC
AAGAAAACGA AGATCTCCTA CTTCGACCAG TTGCGCGAGG TGATCGATCC GAATGAGACC
GTCTACGACT TCTTTGGCGA GGGGGATTAC GTCGCCACGC CGACCGGGGA CAAGCGGCAC
AAGATCGGCT ATCTGGAGGA GTTCCTGTTC TCGCCCGAGG ACAGGCGGCG CCCGGTGGGA
AGCCTCTCCG GCGGAGAGAA GAGCAGGCTC ATCCTCGCCA GACTCATGCT GCAGGACTCG
AACCTCCTGG TGCTCGACGA GCCGACGAAC GACCTGGACA TACCTACCCT GCAGCTTCTC
GACGCCTCCA TCGCCGCCTT TCCGGGTTGC GTGCTGATGG TCACCCACGA CCGCTTCTTC
TTGGACAAGG TCGCCACCGG CATCCTTTCC TTCGAGGGAG AGGGGGATGT CACCTTCTAC
GAGGGGAACT ACAGCAACTA CAGGGAGCGC AAGGAAGAGG CGCGCGTGGC GGCAGTAGCG
CAGCGCGTCG AGAAGAAGGA TACGATCCAG GCCGCCAGGG CCGAGAAGAA GAAGGGGCTC
ACCTACGCCG AGCGTATCGA GCTGGAGAAG CTGGAGCTTA GGATTGCAGA ACTGGAGCAG
GAGTTCGCCG AGGTCGAGGC GCAGCTGGGG GATCCTTCCT GCTACGGCAG CGTCGAAGGG
GGCATCGCCG CCATCACTGC GAACTACGGC AGGCTGGAAG CCGAACTTGC CGCGGCCTTC
GAGCGGTGGG AGGAGTTGGA GACGAAGAAA GGCAATTGA
 
Protein sequence
MNVIDVTGLC KSFGSRELLD QVGFAVGEEE RVGLIGANGA GKSTLLTILA GIEDHDGGSI 
AMKRGASVGY LSQEPVLDES STVAAEIEGG LKEIRAAMAS FNELSERMAS NPPDMDRLLS
RQGELSDWIE HHGGWNTDHR VSEMMTHLQL PDRDQKIGTL SGGTKRRVAL AKLLLQAPEL
LLLDEPTNHL DADTTQWLQD HLKAYPGAVM LITHDRYFLD EVVTRMLELE RGAVISYQGG
YSRYLEQREE RLLNEATRRS RLLNLLRTET DWIRRGPPAR STKQKARIDR YYALEESLAG
PARKELKIGF NTEEGLGGTI LELDCVSKGF GEKKLLKKLT FGMKRGDRVG VIGPNGCGKT
TLIRMIMGEE EPDQGKVVVG KKTKISYFDQ LREVIDPNET VYDFFGEGDY VATPTGDKRH
KIGYLEEFLF SPEDRRRPVG SLSGGEKSRL ILARLMLQDS NLLVLDEPTN DLDIPTLQLL
DASIAAFPGC VLMVTHDRFF LDKVATGILS FEGEGDVTFY EGNYSNYRER KEEARVAAVA
QRVEKKDTIQ AARAEKKKGL TYAERIELEK LELRIAELEQ EFAEVEAQLG DPSCYGSVEG
GIAAITANYG RLEAELAAAF ERWEELETKK GN