| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3274 |
|---|
| Symbol | |
|---|
| ID | 6780132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3765425 |
|---|
| End bp | 3766576 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642769267 |
|---|
| Product | response regulator receiver sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002140067 |
|---|
| Protein GI | 197119640 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCC AGACGGTCAT GATCGTTGAT GATACCCCTG CCAATATCGA GATCCTCAGC
GAGACACTCG GGGAGGAGTA CGAACTTTTC TTCGCCACCA GCGGGGCGGA TGCCCTGGAA
CTGATCCGCG CCGACAAGCC GGACCTGATC CTTTTGGACA TCATGATGCC CGGGATGGAC
GGCTATGAAC TCTGCTCCAT TCTGAAAGGG GACCCCGCCA CCCGCGACAT CCCGATCATC
TTCGTCACCG CCATGATCGG TGAGGAGGAG GAGATCAAGG GGCTGGAACT CGGCGCGATA
GATTACCTCA CCAAGCCGAT CTCCCCCCAC ATCGTGCGCG CCCGGGTGAA GAACCATCTG
GAGCTGAAAA GGTACCGGGA CCTTCTGGAG ACGCTCGCCA GCGCCGCCGA CCGCGCCAAG
AAGGAATTCC TGAGAAGCGT GAGCCACGAG TTGCGCACCC CGCTCACCCC CATCATCGGC
ATGACCGACC TGGTGCTCGA CAGCGAGGAG GACGACAACA AGCGGAAGTA CCTGACCATG
GTGCAGAAAT CCGCGCTGCG CCTTCTGGGA ATCGTCGAGG ACCTGATCGA GACCAGCAGG
CTCGAAGGGG AGGGGACCGC TCCCGAGTAC CGCCCCTTCC TGCTCAAGGC CTTCCTGGAC
ACCGTTGCCA TGGAGGCCCG GACGCAGGCG GAGGGCAAGG GGCTCGATTT CATGGTGACC
CTCGATCCTG CCCTTCCCGA GGCGGTCAGC AGCGACCAGG CGATGCTGCA CAAGGTCCTT
ACCATGCTGC TGGGAAACGC CGTCAAGTTC ACCACGGCCG GCAAAATATC GCTGGAAGTG
CATCTCCAGG AGGTGGCGGG AGAGCAGATG CTGCAATTCT CCGTCGCCGA CACCGGCGTC
GGCATAGATC CGGCCGACCT GGAGCGGGTC TTCAGCGACT TCACCCAGTC CGACGGCTCC
ATCACCCGCT CGTTTCCGGG TCTTGGGCTG GGGCTCACCC TGGCCCGGCG CATGACCGAG
CTTATGGACG GGAGCATCTG GGCGGAGAGC TCGCCGGGAG GGGGCTCCCT GTTCCAGATG
CAGATCCCCC TGCTCCTTCC TGAGTCCGAA TCGGCCGACG CTCCCCCCGC CTCGGACGGA
GTGCGCCAGT GA
|
|---|
| Protein sequence | MKRQTVMIVD DTPANIEILS ETLGEEYELF FATSGADALE LIRADKPDLI LLDIMMPGMD
GYELCSILKG DPATRDIPII FVTAMIGEEE EIKGLELGAI DYLTKPISPH IVRARVKNHL
ELKRYRDLLE TLASAADRAK KEFLRSVSHE LRTPLTPIIG MTDLVLDSEE DDNKRKYLTM
VQKSALRLLG IVEDLIETSR LEGEGTAPEY RPFLLKAFLD TVAMEARTQA EGKGLDFMVT
LDPALPEAVS SDQAMLHKVL TMLLGNAVKF TTAGKISLEV HLQEVAGEQM LQFSVADTGV
GIDPADLERV FSDFTQSDGS ITRSFPGLGL GLTLARRMTE LMDGSIWAES SPGGGSLFQM
QIPLLLPESE SADAPPASDG VRQ
|
|---|
| |