| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3267 |
|---|
| Symbol | |
|---|
| ID | 6780125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 3758867 |
|---|
| End bp | 3760057 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642769260 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002140060 |
|---|
| Protein GI | 197119633 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000221344 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATCC TCGCCAACAC AGTAAGCGTC TGCCATTTCA AGGTCCAGGG AGAACTCCCG
ACCCAGGACC TCTACACCTG GGTCACCAAA CAACTGGCGG CGAACCGCTT CAATCCGATC
GACCAGGGAA GCGAAGAAAT GTCGATCGGC TGGGTCCACC TGGACGACCC GAAAGCAAGC
GACTTCGAGA CCCCCGCGGC CTGCTGCCGC GAGCACTACC TCATGTTCAC CCTGCGCCGC
GACAAGCGCT CGGTCCCCTC GGCCATCCTG AAGGCACACT TGGAGAAGGC GCAGGACGAG
TTCCTCGCGG AGAACCCCGG CTTCACCAAG GTCCCCAAGC AGAAGCGGGA GGACCTGAAG
GAAGCGGTGC AGGCGATGCT CCTTTCGCAG ACGCTCCCGA CCCCGGCCAC CTACGACGCT
GTGTGGGACA CCAGAAGCGG CATCCTCACC TTCACCTCGC TTTCCCCGAA GGTCATCGAA
CTCTTCGAGG AGCAGTTCAA GAAGACCTTC GAAGGGCTTC GCGTCTCCGC GTTCCACCCC
TACGCCCGCG CCGAGAACGT TCTGGACGAA GGGAACCTGG TGCTCCTCAA AAAGGCCAAC
AAGGCCGGCG GCGACAACTA TTTGGAGCTG ATCAAGGAGA ACCAGTGGCT GGGCACGGAC
TTCATGCTCT GGCTCATGTA CCAGACCATG AACGAGGCCT CCGAGTACAG CGTCAACCAG
GAAGGTATCC TGCTGGCGAA GGAACCGTTC GTGGCCTACC TGGACGACCG CGTGGTGCTG
TTAGGCTCCG GCGAAAACGG CGCCCAGAAG ATCACGGTCG CAGGGCCGCA GGACCACTTC
AACGAGGTGA GAAGCGCGCT ATTGAACAAG AAGCAGATCA CCGAGGCGAC GCTGCACCTT
GAGACCGGCG ACGACCACTG GAAGCTGACG CTCAAGGGCG AGCTCTTCCA CCTGGCGTCC
TTCAAGTCGC CGGCGGTAAA GCTGGAAAAG GACAGCAGCG TGGACGAGGC GATGGAGCGG
GAGGCGGTTT TCTTCGAGAG GATGATGCTA CTGGAGAAAG GGACCCAGCT TTTCGATTCG
GTGTTCGCCA CCTTCCTGCA GTTAAGGCTC GGCAGCGAGT GGGTCGAGCA GGAGAAGGCG
ATCCAGAAGT GGCTCAACGT CTGCAGCTTC TGCAACGGGT CGCTGGCGTA G
|
|---|
| Protein sequence | MGILANTVSV CHFKVQGELP TQDLYTWVTK QLAANRFNPI DQGSEEMSIG WVHLDDPKAS
DFETPAACCR EHYLMFTLRR DKRSVPSAIL KAHLEKAQDE FLAENPGFTK VPKQKREDLK
EAVQAMLLSQ TLPTPATYDA VWDTRSGILT FTSLSPKVIE LFEEQFKKTF EGLRVSAFHP
YARAENVLDE GNLVLLKKAN KAGGDNYLEL IKENQWLGTD FMLWLMYQTM NEASEYSVNQ
EGILLAKEPF VAYLDDRVVL LGSGENGAQK ITVAGPQDHF NEVRSALLNK KQITEATLHL
ETGDDHWKLT LKGELFHLAS FKSPAVKLEK DSSVDEAMER EAVFFERMML LEKGTQLFDS
VFATFLQLRL GSEWVEQEKA IQKWLNVCSF CNGSLA
|
|---|
| |