Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3264 |
Symbol | |
ID | 6780122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3756239 |
End bp | 3756928 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642769257 |
Product | ABC transporter related protein |
Protein accession | YP_002140057 |
Protein GI | 197119630 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAAT CCACCCCTCC CATCGTCCGC ATCCGCAACC TTTCCAAGGG TTACCGCCGC GGCACCCAGG TCATCCCGGT TCTCACCGGC ATCAACGTCG ACATCGCCCA GGGAGAATTC GTCGCCCTCA TGGGTCCCTC CGGCTCGGGA AAAAGCACCC TCCTCAATCT CATCGCCGGC ATCGACACCG CCGATGAAGG CTCCATAACC ATCGGAGAGG TGGAGATCAC CCATCTGAGC GAGGGGGAAC TGGCCCGCTG GCGCGCCGGC AACGTCGGTT TCATCTTCCA GTTCTACAAC CTGATACCGG TCCTGACCGC CTTCGAGAAC GTGGAGCTTC CCCTTTTGCT CACCCCCCTG AAAAGGCGCG AGCGGCGCGA GCATGTCGAG GCGGTCCTCT CCGTGGTGGG GCTTGCCGAC CGGATGGATC ACTACCCCTC TCAGCTCTCC GGCGGCCAGC AGCAAAGAGT CGCCATCGCG CGCGCCATCG TCACCGACCC CGAGATCCTG GTGGCCGACG AGCCGACCGG GGACCTCGAC CGCGCCTCCG CCGAGGAGAT CCTGCAGCTC ATGGACCGCC TGGTCCACGA GTTCGGCAAG ACCGTCATCA TGGTCACCCA CGACCCGCGT GCCGCCGAAA AGGCCCACCT CATCAGGCAT CTCGAGAAGG GCGAGTTGAG CGTGAGCTAG
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Protein sequence | MAESTPPIVR IRNLSKGYRR GTQVIPVLTG INVDIAQGEF VALMGPSGSG KSTLLNLIAG IDTADEGSIT IGEVEITHLS EGELARWRAG NVGFIFQFYN LIPVLTAFEN VELPLLLTPL KRRERREHVE AVLSVVGLAD RMDHYPSQLS GGQQQRVAIA RAIVTDPEIL VADEPTGDLD RASAEEILQL MDRLVHEFGK TVIMVTHDPR AAEKAHLIRH LEKGELSVS
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