| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3231 |
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| Symbol | |
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| ID | 6780089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 3720658 |
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| End bp | 3723402 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642769225 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002140026 |
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| Protein GI | 197119599 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCATT CGCTTCAGAA CTGGCAGACA TTGTTCGACA GCATGTCCCA GGGCATGTTC
TGCCAGAACG CGGAGGGAAG CCCCGTCGAG GCAAATGCAT CGGCACTTTC CCTTCTGGGC
CTGGACCGCG AAGCGTTCAT GGCGCACACC CCGCAAAAGC CGCAATGGCG CCTCCTCGCT
CAGGACGGAG GCGACCTTCC CCCGGAACAA CACCCGGCCT CCGTAGCGCT TACTAAAGGA
GAGGCCGTAA CCGGCTTCAC CGCCGGCATC TACACCCCCC ACAATGACGC CACGATCTGG
GTAAAGATCG ATGCCATCCC GATCCAGCAG GGACTTGTCT GCGTCGTCCT GAACGACATA
ACCCAAGAAA AGCTGATAAA GGAGCAGGAA CACCAGGCCG CGCTGCAGTA CGAGCTTCTT
GCCAATACCT CCATGGACGG CTTCTGGGTC GTCGACATGG AAGGAGAGAT CCTCTCGGTG
AACGAAGCCG CCTGCCGCAT GTACGGCTAC AGCCGCGACG AGTTCAGTTC CATGTTCGTC
TACGAGATCG AGGCGCGGGA GGACCGCCAC GAGGTCAGGC AGCATACAGA GAAGGTAGCT
GCGACACGCT ACGACCGCTT CGAGACCGTA CACCGCACGA AGGACGGCAC CCTGATCGAA
GTGGAGGTGA GCACCACCTT CATGCCGCAG AACAGGCGGT TCCTCACCTT CTTGCAGGAC
ATAACCAGCA AGAAGGACGC GGAAAGAGCC CTTCAGCAAA GCGAGGAGAA GTACCGCTCG
CTGTTCGACA ACATGCTGAA CGGCTTCGCC TACTGCAAGA TGATCCTTGA CTCCGATCTC
CCCATGGACT TCGTCTTCCT GGAAGTGAAC CAGAGCTTCG AGAAGCTGAC GGGGCTGCGC
GAGGTGAAGG GGAAGCGGAT GAGCGAGGTG CTGCCGGGGG TCGGCAACTC GGACCCGGAG
CTTCTCGCCG CCTTCAGGCG CGTCGCCCTG AGCGGGGAGC CCGAGCAAGT GGAGTACTTC
CTCTGCGCCA TCAACGAGTG GCTGGCCGTC TCCGTGTACA GCCCGGAACC GGGGTGCTTC
GTCGCGGTCT TCGACGTGAT AACCAAGCGC AAGAGGACCG AGGAGTGCCT GGCATTCCTG
GCCCAGGCGG TCTCCGAACC GGGTGAGCAG TTCTTCCACC GGCTGGCGAA ATACCTGGCG
CAAGCCCTCG ACATGGAATT CATCTGCATC GACCAGCTGG AGGAGGGGAA CCAGTACGCG
CGCACCCTCG CGGTCTACTT CGACGGCAGC TTCGAGGACA ACATCCGCTA CACCCTGCGG
GACACCCCCT GCGGCGAGGT GGTGGGAAAC AGCGTCTGCT GCTACCGCCA GGGGGTGCGC
CACCTCTTTC CGACCGACAC CTTGCTGCAG GAGATCAAGG CGGAGAGCTA CATGGGGACT
GTACTTTGGG GATCCAACGG CGTGCCGATA GGGTTGATCG CTGCCATCGG CAAGAAGCCC
TTGGGAAACC GGGACCTGCC TCAGGAAATC TTCCAGATGG TCAGCTCGCG TGCCGCGGCG
GAGATGGAGC GCGGCCTGCA CGAAGAGGAG CGGCTGAGGC TGGAGCATCA GCTTTTGCAC
GCGCAGAAGC TGGAAAGCCT GGGCATCCTT GCCGGCGGCA TCGCGCACGA CTTCAACAAC
ATCCTCACCG GCATCCTGGG GAATTCCAGC CTCGGGCTTA TGCGCATAGA CCCAGACTCT
CCCGCCGCCG AAAACCTGCA GAACATCGAG AAGGCCGCCG TCAGGGCGGC TGACCTGGCC
AAGCAGATGC TCGCCTACTC CGGCAAGGGG ATGTTCGTCG TGGAACCGGT GAACCTCAAC
CTGCTGCTGG AAGAGATGAT CCACCTGCTG GAAGTCTCGG TATCGAAAAA GGCGGAGCTG
AAGCTCTCCC TGGCCCAGGA GCTCCCTCCG GTGCAGGCCG ATCCGACGCA GCTGCGCCAG
ATCGTGATGA ACCTGGTCAT CAACGCTTCG GAGGCCACCG GAGAGCAGGG GGGGACCATA
TCGATCAGCA CCGGATACCG GTATTTCGAT CAGAGCTACC TGAAAGAGGC CTGGTTCGAC
TGCGAGCTCG CCGAAGGGGA GTTCGTCTTC CTGCAGGTGG CGGATACCGG CTGCGGCATG
GACGAGAGCA CGCTTTTGCG CATCTTCGAC CCCTTTTTCA CCACCAAATT CACCGGTCGC
GGGCTCGGCA TGTCGGCGGT ACTCGGTATC ATCAGGGGGC ACAAGGGCGC CATCAAGGTG
CAAAGCAAGA CCGGGGAGGG AACAACCTTC ACCGTGCTGC TTCCGGCGAG CGACCTCCCG
GTGCTGGTGA AGGAAGCCGA CCAGAAGATG GACAACTGGC AGGGGAGCGG GACCATCCTT
CTGGTCGACG ACGAGGAGAC CATCTGCGAC ATCGGGGCGA TGATGCTGGG GCAGTTGGGA
TACGAGGTGG TGACGGCGCT TTCCGGCAGC AGTGCGCTGC AGACCTACCG GTCGCGGCCG
GATATCAAAT TCGTGATCCT GGATCTCACC ATGCCGCAGA TGGACGGGGA GCAGACCTTC
GACGCGCTGA GAGCGCTCGA CCCAGAGGTG AAGGTGATCA TGTCCAGCGG CTACAGTGCC
CAGGAAGTAA CCGGGAAGTT CACCGGAACC GGTCTGCTCG ATTTCATCCA GAAGCCGTAC
AGCATGCAGG CCCTTCTCGA AGTGATGAAG AGGTGCGACA GGTAA
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| Protein sequence | MFHSLQNWQT LFDSMSQGMF CQNAEGSPVE ANASALSLLG LDREAFMAHT PQKPQWRLLA
QDGGDLPPEQ HPASVALTKG EAVTGFTAGI YTPHNDATIW VKIDAIPIQQ GLVCVVLNDI
TQEKLIKEQE HQAALQYELL ANTSMDGFWV VDMEGEILSV NEAACRMYGY SRDEFSSMFV
YEIEAREDRH EVRQHTEKVA ATRYDRFETV HRTKDGTLIE VEVSTTFMPQ NRRFLTFLQD
ITSKKDAERA LQQSEEKYRS LFDNMLNGFA YCKMILDSDL PMDFVFLEVN QSFEKLTGLR
EVKGKRMSEV LPGVGNSDPE LLAAFRRVAL SGEPEQVEYF LCAINEWLAV SVYSPEPGCF
VAVFDVITKR KRTEECLAFL AQAVSEPGEQ FFHRLAKYLA QALDMEFICI DQLEEGNQYA
RTLAVYFDGS FEDNIRYTLR DTPCGEVVGN SVCCYRQGVR HLFPTDTLLQ EIKAESYMGT
VLWGSNGVPI GLIAAIGKKP LGNRDLPQEI FQMVSSRAAA EMERGLHEEE RLRLEHQLLH
AQKLESLGIL AGGIAHDFNN ILTGILGNSS LGLMRIDPDS PAAENLQNIE KAAVRAADLA
KQMLAYSGKG MFVVEPVNLN LLLEEMIHLL EVSVSKKAEL KLSLAQELPP VQADPTQLRQ
IVMNLVINAS EATGEQGGTI SISTGYRYFD QSYLKEAWFD CELAEGEFVF LQVADTGCGM
DESTLLRIFD PFFTTKFTGR GLGMSAVLGI IRGHKGAIKV QSKTGEGTTF TVLLPASDLP
VLVKEADQKM DNWQGSGTIL LVDDEETICD IGAMMLGQLG YEVVTALSGS SALQTYRSRP
DIKFVILDLT MPQMDGEQTF DALRALDPEV KVIMSSGYSA QEVTGKFTGT GLLDFIQKPY
SMQALLEVMK RCDR
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