Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3198 |
Symbol | |
ID | 6780057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3688733 |
End bp | 3689410 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642769194 |
Product | putative PTS IIA-like nitrogen-regulatory protein PtsN |
Protein accession | YP_002139995 |
Protein GI | 197119568 |
COG category | [G] Carbohydrate transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.22745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGATGA AGGCGTCGGA AGTGGCCACG CTGCTCAAGG TGGACGAGAG CGTGGTGGCC AAGTGGATCA AGAAGGAAAA GCTGCCGGCC ACCATGGTGC AGGGGAGTTA CCGGATCAAC CGCGTCGATC TCCTGGAATG GGCGACCGAC CACAGCATCA AGGTACCGCC CGAACTGTTC GAGGCGGCGC AGGCGGATGT CGTGTTGCCG ACCCTGAGCC AGGCACTGGA GGCGGGCGGG GTGCACTGCG GGGTTCCCGG GGACGAAAAG CTTTCCGTGC TGAGAAACGT GGTGAGCCTG ATGAAGCTCC CTCCCAGGAT GGACCCGGAG TTCCTGCTCC AGGTGCTTCT GGCGCGCGAG GCCTTGGGGA CCACCGCCAT CGGGGACGGG ATCGCCATCC CCCACGTCCG CAACCCGATC CTCTTGCAGG ACAAGCCGGT CCCCGCCATC TCGCTCTGTT TCCTGGAGCA TGCCGTGGAT TTCGGCGCTC TCGACGGCGA GCCGGTCAGG ATTCTCTTCA TGCTGACCAG TCCGACCGTG AAGGTGCACC TGCACCTTTT GTCGCGGCTA GCCTACGCCC TGCACGATGC CGAATTCAGG GCGACTTTGA ACCACGCCTG CGACCCCGCG GCCATTCTGG AAGCCGCCCG GCGCTTCGAG CGCGGCAAAA GGAGCTGA
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Protein sequence | MLMKASEVAT LLKVDESVVA KWIKKEKLPA TMVQGSYRIN RVDLLEWATD HSIKVPPELF EAAQADVVLP TLSQALEAGG VHCGVPGDEK LSVLRNVVSL MKLPPRMDPE FLLQVLLARE ALGTTAIGDG IAIPHVRNPI LLQDKPVPAI SLCFLEHAVD FGALDGEPVR ILFMLTSPTV KVHLHLLSRL AYALHDAEFR ATLNHACDPA AILEAARRFE RGKRS
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