Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3136 |
Symbol | |
ID | 6779995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3619909 |
End bp | 3621588 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642769133 |
Product | nickel-dependent hydrogenase large subunit |
Protein accession | YP_002139934 |
Protein GI | 197119507 |
COG category | [C] Energy production and conversion |
COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAGAA TCACGCTTGA TCCCATCACC CGCATCGAAG GGCACCTCAG GATAGACGTC GAAGCCAACG GCGGCAAGGT TACCAACGCC TGGTCCTCGG CCCAGATGTG GCGCGGCATC GAGGTCATCC TCAAGGGGCG CGCCCCCGAG GACGCCTGGA GCTTCGTGCA GCGCTTTTGC GGCGTCTGCA CCACGGTGCA CGCCATCTCC TCGATCCGCG CCGTAGAGCA CGCCCTGAAC GTCGAGGTGC CGCTCAACGC CCAGTACATC CGCAACATCA TGATCGCCCA GCATTCGGTG CAGGACCACA TCGTCCACTT CTACCACCTC TCGGCGCTGG ACTGGGTCGA CATCGTCTCG GCGCTCAAGG CCGATCCCAA GAAGACCGCG CAGATAGCCC AGAGCATCTC CGACTGGCCG GGTAACTCGG AGAAGGAGTT CAAGGCGGTC CAGGACAAGC TGAAGGCGTT CGTCGCCGGC GGCAAGCTTG GCATTTTCGC CTCCGGCTAC TGGGGGCATC CGGCCATGAA GCTCTCTCCC GAGGTGAACC TGATGGCGGT GGCTCACTAC CTGAAGGCGC TCGACTACCA GAGAAAGGCG TCCCAGGCGA CCGCCATCCT GGGGGGGAAG AACCCGCATA TCCAGAACCT CGTGGTCGGC GGCGTCGCCA CCGCGATCAA CACCGAGAAC ATAGCCACCC TCAACATGGA GCGCCTCATC TACCTGAGGA CCCTGATGGA GGAGACCCGC GACTTCGTGC AGAAGGTGTA CTACCCGGAC CTCCTCGCCA TCGCCGGCGC CTACAAGGAT TGGTTCAAGT ACGGGGCAGG GGTCACCAAT TACATGGCGG TCCCCGAGTT CCCGGAAGAC ACCAAAAACG GCAAGTTCTC GCTCCCGGGC GGCGTGGTCA TGGCGGGGAA CATCGCCGGC ATCAGGCCGG TCAAGGACCA TCGCGACGAA TACCTGATCA AGAACATCAA GGAAAACGTC ACCCACGCTT GGTACGAGGG GAACGGCACG CTGCACCCCT GGGAAGGGGA GACCAAGCCC GACTACACCG ACTTCAAGGA AAACGGAAAG TACTCCTGGT GCAAGGCGCC GACCCTGGAC GGAAAGCCGG TGCAGGTAGG TCCTCCGGCC CAGATCATGG CCGCCTACGC CGCAGGAAAC CCGAAGGTGA AAAAGCTCGT CGACGGCGCC GTCTCCACCC TCGGCCTCTC GATGAAGGAC ATCCACTCCA CCATGGGGCG CCTGTACTGC CGCGGCGCGC GCGCCCACAT CATGGCCGAC ATCGCGCTGG AAAACCTGGA CAAGCTGATC GCCAACATCG CCACCGGCGA CCAAACCTAC GCGAACCACA CCGAGATCCC CAAAGGGGAG TATCGCGGGG TGGGCTTCCA CGAGGCGCCG CGCGGCACCC TGAGCCACTG GATCGTCATC AAGGACAAGA AGATCGAGAA CTACCAGGCC GTCGTTCCCT CCACCTGGAA CGCCGCTCCC AGAAATGACA AGGGAGAACT CGGCCCCTAC GAGGCGTCGC TCGTCGGGAA CCCCATCGCC GACAGCAGCA AGCCGCTGGA GGTCTTGAGG ACCATCCACT CCTTCGACCC CTGCATCGCC TGCGCCGTGC ACACGGTCGA CCCCGAAGGA AAGGAAATCA CCAAGGTGAA AGTGCTGTAA
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Protein sequence | MSRITLDPIT RIEGHLRIDV EANGGKVTNA WSSAQMWRGI EVILKGRAPE DAWSFVQRFC GVCTTVHAIS SIRAVEHALN VEVPLNAQYI RNIMIAQHSV QDHIVHFYHL SALDWVDIVS ALKADPKKTA QIAQSISDWP GNSEKEFKAV QDKLKAFVAG GKLGIFASGY WGHPAMKLSP EVNLMAVAHY LKALDYQRKA SQATAILGGK NPHIQNLVVG GVATAINTEN IATLNMERLI YLRTLMEETR DFVQKVYYPD LLAIAGAYKD WFKYGAGVTN YMAVPEFPED TKNGKFSLPG GVVMAGNIAG IRPVKDHRDE YLIKNIKENV THAWYEGNGT LHPWEGETKP DYTDFKENGK YSWCKAPTLD GKPVQVGPPA QIMAAYAAGN PKVKKLVDGA VSTLGLSMKD IHSTMGRLYC RGARAHIMAD IALENLDKLI ANIATGDQTY ANHTEIPKGE YRGVGFHEAP RGTLSHWIVI KDKKIENYQA VVPSTWNAAP RNDKGELGPY EASLVGNPIA DSSKPLEVLR TIHSFDPCIA CAVHTVDPEG KEITKVKVL
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