Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3085 |
Symbol | |
ID | 6779944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3570580 |
End bp | 3571320 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642769082 |
Product | thiamine pyrophosphate protein domain protein TPP-binding |
Protein accession | YP_002139883 |
Protein GI | 197119456 |
COG category | [C] Energy production and conversion |
COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.186779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACAGG TTTTTAAGAG ACCGCAAAGC TTGAAGGACG TGCAGACCCA TTTCTGCCCC GGGTGCCATC ACGGCACCAT CCACCGCCTG GTGGCGGACG CCATGGACCT CCACGGCGTG CAGGAAAGGA CCATCGGGGT GGCGTCGGTC GGCTGTTCCG TCTTTCTCTA CGGCTACTTC GACATCGACG TCGTCGAGGC TCCCCACGGG CGCGCTCCCG CGGTAGCGAC CGGCGTCAAG CGCGCGAAGC CGGACAACTT CGTCTTCACC TACCAGGGGG ACGGCGACCT TGCCGCCATC GGGACCGCGG AGATCATCCA TGCCGCCAAC CGGGGCGAGG ACATCACCGT CATCTTCGTC AACAACACGA CCTACGGCAT GACCGGCGGC CAGATGGCCC CGACCACCCT GGTCGGTCAG AAGACCTCCA CCTCCCCGTA CGGCAGGGAC AAGTCCAAGG ACGGCTCCCC GATCAGGATG GCGGAACTGA TGGCGCAGCT GGGCGGGGTG GCCTACTCGG CCCGCGTGGC GGTGGATTCT CCCAAGCACG TCCTGGAGGC GAAGAAGGTG ATCCGCGAGG CGTTCGGCTA TCAGGTTCAG GGGAGGGGGT TCTCCTTCGT GGAAGTGCTC TCCGCCTGCC CGACCAACTG GGGGATGAAC CCGCTCAAGG CGAACGCGCG GGTCGGCGAG GAGATGATCC CTTACTTCCA GTTGGGGGTC TTCAAGAAGG AAGAGGCGTA G
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Protein sequence | MQQVFKRPQS LKDVQTHFCP GCHHGTIHRL VADAMDLHGV QERTIGVASV GCSVFLYGYF DIDVVEAPHG RAPAVATGVK RAKPDNFVFT YQGDGDLAAI GTAEIIHAAN RGEDITVIFV NNTTYGMTGG QMAPTTLVGQ KTSTSPYGRD KSKDGSPIRM AELMAQLGGV AYSARVAVDS PKHVLEAKKV IREAFGYQVQ GRGFSFVEVL SACPTNWGMN PLKANARVGE EMIPYFQLGV FKKEEA
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