| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3052 |
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| Symbol | |
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| ID | 6779908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3521690 |
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| End bp | 3525121 |
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| Gene Length | 3432 bp |
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| Protein Length | 1143 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642769046 |
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| Product | cytochrome C family protein |
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| Protein accession | YP_002139850 |
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| Protein GI | 197119423 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01904] Geobacter sulfurreducens CxxxxCH...CXXCH domain
[TIGR01905] doubled CXXCH domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGCT GCCGCAGTCT GAAATGCTGC AACCTGATGT TGAGTTTGAC GATGCTGTTC
CTTTTAATGG GCATTCTCTC CGTCTCCGGT CAACCGGCGC ATGCTTCAGC ACGGCAGTAC
GTCATGACCT GCATCTCCTG TCACAAAATG CCTCCCCTCG ACTCGGCCGA CGGCAGCAGG
ATTCCGTTCA CGGGTGCCGT CATGGGGAGC CATTCGGGGC ATGCCTCGGC CTCAACCTCC
TCCTGCGCTA AATGCCATCG CGACGATGTC GCCAACTACC GTACCGCCCA TCGAAACCGT
TTGATCGAAA TTTCTACCGG AATCAACAAC GTGGCCGGCG CCACCTACAG TCGCGGCTTC
TTCAACCAGA CCTCGGTTCC CCCCCAAATC TTGGGGACCT GCTCCAACGT CGACTGCCAC
TTCGAGTCGA CTACCCCCTC TTGGGGAACT TCCATGCTCA AAGCTCCAGA GGACTGCTCG
GCCTGCCACG GCTCCGCACC TGCCGACGGC AACCACCCGG GATCGGGGCA AAAACACGGC
GCCTACTACG GCACCGGCAC CGGCTCCTGC GCCGTATGCC ATCCCGATCA TCTTGGGGAC
GCGAAGCCCT TTGCCCACGC CACCAGCGCA GGGAGCCGCG CCCTCGCGGT TCAATTCACC
ACGCTTCCCA ACAGGGGGGG GAGCTATTCG CGTGACCTTA GTTACCCCAA TTACCTCCCC
AGCAAATCAG GGCTGCGCAA CGGCAGCTGC CTTGGTCTGT ACTGCCACAG TCCGGGCAAT
AAAAACAGCA GCTTCGATGC CCCGAACCAG GTCGCCACTT GGGGGGGGAC ACTCAACTGC
GCCGGCTGCC ACAAGGCAGG CCTCGCCTCC GGCAGCGTCA TGACCAGCGG CAGCCACGCC
AAACACGTCG ACGGTTCGGT CTCTTCTTTT GCCTGTTCCA AATGCCACTT TGCCACCGCC
ACTAGCTCGA TGACCATCGC CGACGTGGCG CAGCACGTAA ACGGACGCGT CGACATCTCC
TTCGGCTCCA GCACTAGCGC CGTCAACGGC TCGTACAACG GTATCGTTTC GCCGGTATCG
AAACTCCCCG GCAGCGGATA CGGGGCCTGC TCCAACGTCT ATTGCCACTC CAACGGACAA
AGCGAAGGGG GCGTCGGCAT CGCCTACCGC GCACCGGTCT GGGGCAGCGG CACTACCGGC
AAATGCGGCT CCTGCCATGC AGACGGCAGC AACCACAACG AGGCCGCTGC GGCCATGTCC
AGCGGCAGCC ATCAAAAGCA TCTTTCTTAC ACGCTTCTTG CCACCAGCGG CCCGGTCCGT
TGCACCATCT GCCACAACGT AAAAGGTGCG AAATTTGTTG CGTATGCCTC GTGCAGCCAG
ATGAGCTGTC ACTCAACCGG CGGGGCGCTC AACCACTCCG ACCAGGAAGT GAACGTGAGC
CTGGTAACTT ATTTTGGCGG AACTTATGAC GGCACCCGGG CTCCCGGCGA CGGCTACGGC
GCCTGCGCCA ACGTCTACTG CCACAGTAAT GGGCAAGCCG TCCCGAGCTA CGCCCCTCCC
GTCACCTGGG GCGCCGGGAC CTTGCGCTGC GATGCGTGCC ACGGCTCCGC CACCAGCAAG
GGGGGCAGCG ACACCACGAC CGCTCTTTCC GGCAAGCACG GAGCACACGT GAACAACCCG
GCGGCGCTCG GCGCAGGCAA AAGCCTGCAC TGCATCGATT GCCATAGCAT CACCGTCAGA
AACGACACGA CCATCGCCTC GACCGCGGTT CACGTCAACA AGATGCTCAA CTACACGGGG
CTCTATGCCG GCGGGCCCAA ACGCTACAAC AGCACCACCA AGGTCTGCTC CAACATCTAC
TGCCACAGCT CCGGGCAGGC GAAGCCCGTG TTCCGCAACA TGACCGGCAC CAAGTCCTGG
GCCTCGACCG GCACTCTTTC CTGCAACGGT TGCCACGGCT ACGGACCGGG CGCCTTCGCC
TCGGTAGCGG GGGAACCGAA CTACCCGAAC GGAGGCATCG GTTCGGGCAC CGCGAACTCG
CACCAGAAAC ATACGGCAGG GGCGAACCTG CTGGATTCGC GCGTCTGTGC CAGGTGCCAC
CGCGGTACTG CGGATCAGGG TGTTGCCGGA AAGCTGCGCG ATTACAGCTC GGCGCACCTA
AACGGCTCCC GCGACGTGAG ATTCGCCGTG CTCGGCAATA TCTCCGGTGA CTACAGCGCT
GCCACCAAGA GCTGCTCCAA TACCTATTGC CACGGTGGAG GCTCCGTCCA GTGGGGTGGT
CAAGGGCCGC TTGCCTGCAA CAGCTGCCAC GGTGACGCCG AGACGCTCAG CACCAACGCC
CACGCCAGCC ACGTAAGCCC GAGCTCCGGC AAGGGGATCT CCTGTGCCGT CTGTCATGCC
GCGACCGCAG CCGCCGACGG TTCAATCTCA AACCGGACTA TTCATGCCGA TGGCCAAAAG
GACGTCGTCT TCTCCGGCGC AGCCCTAGGG ACACAGATGG ATCTCACCGG CAACTGCTCG
ACGAGTTACT GCCACAGTAA CGGCAAAGGG AGTTACTCCA CCCCGAAGTG GTCCGCGACG
TCTACCGGCG CCTGCGGTAC CTGCCATGCG ACGGCGCCCG GGCTCGGCAG ACCCTTCATC
GCAAGTGGCG CCCATTTCAG CCACTTCAGC ACCGCCGCTA CCAGCTACGG GCCGATGTTA
AGCGGCGGGA ACGCGACCGG CTGCCAGGCC TGCCACGACT TCGCCAACGA GTCGGCTTCC
ACCCACATCG ACCAGAGCGT GAATCTGAGC AGCTCGCTTG GGTACTCCAC AAGCGGCACC
GGCACCTGCT CTCCCTGCCA CACCAAAGCG GTTAGCTGGA CCGCCGGTGC CGTCTCCTGC
GAGAGCTGCC ACACAGGCAC TCTCTCCGTG ATAAACGGCG TCACCGCCAG CGACAAGAGT
CAGGCTGCCA CGCGCGGCCA CGGTGCTTCG GGGGTCGGGA AGGGATGTGC CGACTGCCAC
GAACGCAACG CGCGGCACAT AAACGGCGGC TCCCGTCTGC GGGCGCAACT TTCCGGCGGG
CTGAACCTTG AGTGCAACTA CTGCCATGAC GACTCCTCCC AAGTGCTGAA CTCGAGTTCC
CGGAACATGG GTACCCACGT CTTGGTCAAG GGGGGGATCC CGGCCATGGA GTGCGCGCAA
TGCCACGACC CGCACGGCTC GGCTAACCTC AAGATGATCA GAGCCGTCAT CAACGGCAAG
GAGATCGTCT TCAACGACAT GGTGAACGGT TTGATCGACA CCGTGACCAA CCATGGCATT
TGCCAGGTCT GCCACACCCA GACCGCCCAT TACCGCGCCG GAATTCCCGA AACCGATCAC
CCGACCTCGG GCTGCCTCTC CTGCCACCCT CATGGCGGAG CCGGGGGCGC GTTCAAAATT
CAGGCACCCT GA
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| Protein sequence | MKSCRSLKCC NLMLSLTMLF LLMGILSVSG QPAHASARQY VMTCISCHKM PPLDSADGSR
IPFTGAVMGS HSGHASASTS SCAKCHRDDV ANYRTAHRNR LIEISTGINN VAGATYSRGF
FNQTSVPPQI LGTCSNVDCH FESTTPSWGT SMLKAPEDCS ACHGSAPADG NHPGSGQKHG
AYYGTGTGSC AVCHPDHLGD AKPFAHATSA GSRALAVQFT TLPNRGGSYS RDLSYPNYLP
SKSGLRNGSC LGLYCHSPGN KNSSFDAPNQ VATWGGTLNC AGCHKAGLAS GSVMTSGSHA
KHVDGSVSSF ACSKCHFATA TSSMTIADVA QHVNGRVDIS FGSSTSAVNG SYNGIVSPVS
KLPGSGYGAC SNVYCHSNGQ SEGGVGIAYR APVWGSGTTG KCGSCHADGS NHNEAAAAMS
SGSHQKHLSY TLLATSGPVR CTICHNVKGA KFVAYASCSQ MSCHSTGGAL NHSDQEVNVS
LVTYFGGTYD GTRAPGDGYG ACANVYCHSN GQAVPSYAPP VTWGAGTLRC DACHGSATSK
GGSDTTTALS GKHGAHVNNP AALGAGKSLH CIDCHSITVR NDTTIASTAV HVNKMLNYTG
LYAGGPKRYN STTKVCSNIY CHSSGQAKPV FRNMTGTKSW ASTGTLSCNG CHGYGPGAFA
SVAGEPNYPN GGIGSGTANS HQKHTAGANL LDSRVCARCH RGTADQGVAG KLRDYSSAHL
NGSRDVRFAV LGNISGDYSA ATKSCSNTYC HGGGSVQWGG QGPLACNSCH GDAETLSTNA
HASHVSPSSG KGISCAVCHA ATAAADGSIS NRTIHADGQK DVVFSGAALG TQMDLTGNCS
TSYCHSNGKG SYSTPKWSAT STGACGTCHA TAPGLGRPFI ASGAHFSHFS TAATSYGPML
SGGNATGCQA CHDFANESAS THIDQSVNLS SSLGYSTSGT GTCSPCHTKA VSWTAGAVSC
ESCHTGTLSV INGVTASDKS QAATRGHGAS GVGKGCADCH ERNARHINGG SRLRAQLSGG
LNLECNYCHD DSSQVLNSSS RNMGTHVLVK GGIPAMECAQ CHDPHGSANL KMIRAVINGK
EIVFNDMVNG LIDTVTNHGI CQVCHTQTAH YRAGIPETDH PTSGCLSCHP HGGAGGAFKI
QAP
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