| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3041 |
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| Symbol | |
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| ID | 6779897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3507518 |
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| End bp | 3508015 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642769035 |
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| Product | type VI secretion system effector, Hcp1 family |
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| Protein accession | YP_002139839 |
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| Protein GI | 197119412 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTTG ACGCGTTCCT GAAAATAGAA GGGATACCGG GGGAGAGTAC GGACGACAAG
CACAAGGAAT GGATCGAGAT CCTTTCTTAC AATTTCTCGG TGATGCAACG CCCCTCCGGT
TCGGCGAGCA CCTCCGGCGG CGCTTCCTCC GAAAGGGCGA CCTTCTCGGA CTTCAACATC
GTGAAGGCGC TGGACAAGGC GTCTCCGAAG CTTTTCGAAG CCTGCGCCAC CGGCCGGCAC
ATCCCCACCA TCACGCTGGA ACTGTGCCGG GCAGGCGGAG ACAAGCTGAA GTACATGGAG
TACAAGCTCA GCAACGTCAT CATCAGCATG AACCGCCCCG GCGGCACCTC GCACGCCGAC
GAAACCCTCC CTCTTGAAGA GATCTCCTTC AACTACGGCA AGATTGAGCT GGCCTACACC
CATCAAAACC GCGCCGACGG TTCGAGCGGC GGCCAGATTG CCGCCGGCTG GAACCTCGAA
AGCAACAAGA AGGTTTGA
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| Protein sequence | MAFDAFLKIE GIPGESTDDK HKEWIEILSY NFSVMQRPSG SASTSGGASS ERATFSDFNI
VKALDKASPK LFEACATGRH IPTITLELCR AGGDKLKYME YKLSNVIISM NRPGGTSHAD
ETLPLEEISF NYGKIELAYT HQNRADGSSG GQIAAGWNLE SNKKV
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