| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3038 |
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| Symbol | |
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| ID | 6779894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3504210 |
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| End bp | 3505241 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642769032 |
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| Product | type VI secretion protein, VC_A0111 family |
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| Protein accession | YP_002139836 |
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| Protein GI | 197119409 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTCAG CCGGGACCGA AGAGTGTCCA AAAATAAGAA AGCGCCTGTT GCTGGAGTTT
CACCGCTACT CCTTTTTCCA GGCGGTGAAT TATCTGGAAC GAAGCCGGTT GGAGGGGCGC
GATCTCGGGC AGGCCTTGAG TCCGAAAGAG GAGCCGGTCC GCTTCCGCGC CCGCACCGGC
TTTTCGTTTC CCGCCAGCGA CATAGCGAAC CTGGAGGAGG GAAGGGACGG AGCTCCCCCG
CAGATGGAAG TGGCGTTTAT GGGAGTGGTC GGGCCGTCGG GAACGCTTCC TAACTGGTAC
CACGAACTGG CGCTGGAGCG GGGTCGGGCG AAGGACCCGG CGATGATAGC CTTTTACGAT
CTCTTCCATC ACCGGCTCAT CTCGCTGTTT TACCTTGTCT GGAAGCGAAG TCGTGTCATG
CCTGGCAAGA AGAGTGACCA TTCGGACCGC TTTTCCAACT ATCTCCTCAA CATCATCGGG
CTGGGAACAC CGGGACTAGC CGGGGTCTGC TCTCCTGGGG GGGTACCGCT TTTTTTCTGT
GGACAGATCT CCCGAAACAT CCCCACCGCT GGAATGGTAG CTGCGGTGGT GCAGTACCAG
CTAGGCCTGG CGGCGGAAGT GGAGCAGTTC GTCCCCAGGC TGATCACTTT GGAGCCGGAG
GACAGGACGA TCATTGGAGA AGGCAATTGC GAGCTTGGTA AAAATGCGAG CTGCGGCGGC
GAAGTATGGG AGAGCCAGAC AACCTTCCGC CTCTGTCTCG GTCCCATGTC GCTTCGAGAG
TTCAACGACA TGCTCCCCGG GGGGGGAAGG CTAACCTCGT TAGTCGCGTT TGTCAGGTAT
CTGGTAGGCG TGGAGTACGA GTTCGAGGTG CGGCTGGTTT TAAAGAAGGA AGAAGTCCCA
ACGTTGATGC TGGGAGAAGC AGGACCGGAT GCGCCAAGGC TTGGCTGGTC CATGTGGATG
AAGGCGCCGG GGACGACGCT GTCTGACGAT CCTTACGTGA CACTGCGGGA AGTCTATGCA
ACCAGCCACT GA
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| Protein sequence | MHSAGTEECP KIRKRLLLEF HRYSFFQAVN YLERSRLEGR DLGQALSPKE EPVRFRARTG
FSFPASDIAN LEEGRDGAPP QMEVAFMGVV GPSGTLPNWY HELALERGRA KDPAMIAFYD
LFHHRLISLF YLVWKRSRVM PGKKSDHSDR FSNYLLNIIG LGTPGLAGVC SPGGVPLFFC
GQISRNIPTA GMVAAVVQYQ LGLAAEVEQF VPRLITLEPE DRTIIGEGNC ELGKNASCGG
EVWESQTTFR LCLGPMSLRE FNDMLPGGGR LTSLVAFVRY LVGVEYEFEV RLVLKKEEVP
TLMLGEAGPD APRLGWSMWM KAPGTTLSDD PYVTLREVYA TSH
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