Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3022 |
Symbol | |
ID | 6779878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3489667 |
End bp | 3490869 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642769016 |
Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
Protein accession | YP_002139820 |
Protein GI | 197119393 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase [COG0807] GTP cyclohydrolase II |
TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.225515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGTTG CAAGCATAGA GGAAGCGATT GAGGAGATCA GGGCCGGCAG GATGGTCATC CTCGCGGACG ACGAGGACCG CGAAAACGAA GGCGACCTCA CCATGGCGGC CCAGTGCGTG ACGCCTGAGG CCATCAACTT CATGGCGAAG TATGGCCGCG GCTTGATCTG CCTCACCATG ACCTCGGAGC GTTGCGACCG CCTCGACCTG CAGCCGATGG TGCAGACCAA CACCTCATCC TTCGGCACCG CTTTCACCGT TTCCATCGAA GCGAAGAAGG GCGTTACCAC CGGCATCTCG GCGGCGGACC GCGCCCATAC CATACTTACC GCCGTGGCAC CCGACGCCAC TGCTGCGGAC CTGGCGCGGC CGGGCCACAT CTTCCCGCTC AGGGCCCGCA ACGGCGGCGT CCTGGTGCGC TCCGGGCAGA CCGAAGGCTC GGTCGACCTG GCGCGTCTCG CCGGGGTGGA GCCTGCCGGC GTCATCTGCG AGATCATGAA CGACGACGGC ACCATGTCGC GCATGCCCGA ATTGAAGAAG TTCGCCAAGG AGCACGGCAT CAAGGTCTGC ACCGTCGCAG ATCTCGTCGC CTACCGCCTC AAGCACGAAT CGCTGGTGCG CCGCTCGGTC GACGTGGCGC TCCCGAGCCA ATACGGCAGC TTCCGCGCCG TTGCCTTCGA GAACGACATC GACAAGCTTG AGCACCTGGC CCTGGTCAAA GGGGACATCA AAGGCGACGA GCCGGTATTG GTGCGGGTCC ATTCCGAATG CCTCACCGGG GACGTCTTCG GCAGCGTCAG GTGCGACTGC GCCGATCAGC TGCACAGCGC CATGGAGCGG ATCGAGAAGG AAGGAACGGG AGTAATCCTT TACATGCGCC AGGAAGGGCG CGGCATCGGG CTCACCAACA AGCTCAAAGC GTACGCACTG CAGGACCAGG GGCACGACAC GGTGGAGGCC AACCTCGCCC TCGGCTTCAA GGCGGACTTG AGGGACTACG GCATCGGCGC GCAGATCCTG GTGAACCTGG GCGTGAAGAA GATTCGTCTC ATGACCAACA ACCCGAAGAA ACTCATCGGC CTTCAGGGGT ACGGCATCAA CATCGTCGAG CGTGTTCCCA TCGAGATCGC GGCTTCCAAA AGCAACGAGA AATACCTGAA GACCAAGCGC GAGAAGATGG GACACCTGCT GGAAAACATT TGA
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Protein sequence | MSVASIEEAI EEIRAGRMVI LADDEDRENE GDLTMAAQCV TPEAINFMAK YGRGLICLTM TSERCDRLDL QPMVQTNTSS FGTAFTVSIE AKKGVTTGIS AADRAHTILT AVAPDATAAD LARPGHIFPL RARNGGVLVR SGQTEGSVDL ARLAGVEPAG VICEIMNDDG TMSRMPELKK FAKEHGIKVC TVADLVAYRL KHESLVRRSV DVALPSQYGS FRAVAFENDI DKLEHLALVK GDIKGDEPVL VRVHSECLTG DVFGSVRCDC ADQLHSAMER IEKEGTGVIL YMRQEGRGIG LTNKLKAYAL QDQGHDTVEA NLALGFKADL RDYGIGAQIL VNLGVKKIRL MTNNPKKLIG LQGYGINIVE RVPIEIAASK SNEKYLKTKR EKMGHLLENI
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