| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2939 |
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| Symbol | |
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| ID | 6779793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3393758 |
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| End bp | 3397597 |
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| Gene Length | 3840 bp |
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| Protein Length | 1279 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642768934 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_002139738 |
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| Protein GI | 197119311 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.111329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGCGTC TCACTCTTTT ACTCGCTGCG TTTTGCTTTC TTTTAGCCGC CTCCGCGGCT
TTGGGTGCGG ACTCCAAGGC GCGCATGATC CGGGTCGCCG CGTTCAATTT CTACCCCTGC
ATCTTTCAGC AGGAGGGGAA GGTCCAGGGG GGCTTCGTGG ACCTGATCGA CGAGGTGGCC
CGGCGCGAAG GATGGAAGGT CGAGTACCTC TACGGCGACT GGGCCGACGG CATCTCCCGC
ATCAAGAACG GGGAGGTCGA CCTCCTCACC GCCGTCGCCT GGACCCCCGA GCGCTCCAAG
TTCCTCGACT ACTCGAAGAC CCCTCTTCTG ACCGTGTGGG GGGAGTTGTA CGTCCGCCGC
CAGTCCCAGC TGAGCAACCT GAAAGAGATC CAGGGAAAGA GCGTCGCCGT GATGAAGGCC
GACTTCAACG GCGCCAGCTT CCGCAACATG ATCGACAAGT TCGGCATCAG CTGCCGATTC
GTCGAGTACG GCAACTTTGA GCAGATCTTC GACGCCGTCT CCTCGGGCAA GGTGGACGCC
GGCGTGGTCA ACAACACCTT CGGCACCGCC AAACAGCACC AGTACGGTCT CGCCTCCTCC
GGGATCATCT TCAACCCCTT CGATATCTAT CTCGCCGCCG GCAAGGGCGA AAACGTCCAG
GTGCTCGCCG CCTTGGACCG GTACCTGGCC GCCTGGCGCG CCGCAGAGGG CTCCCCCTAC
CACCTTGCGC TCAAGCGCTG GTCCTACGGC AACGCGGCCG CGCTCCACGT CACCCCCCAA
TGGCTCTTTC CCGCCTTGAT CGGCTGCGTC CTTATCTGGG GGGCGGCGAC TGCGTTCATC
GTACTTTTGC GCAGGCAGGT GAACCGCAAG ACCCGGGAGA TGGCGCGACA GGCGGAGGAT
CGCCTGAGGA TCGAGGAGAC CCTCTTCTTC ATCAACGAGT GCGGTGCCCG ACAGCGCGAG
GACGAGCTCC TTGCCGGGAT CTGCCAGTAC CTCTGCGCCT GCCTGGATAC CGACTACGCC
TTCGTCGGAG AGCTGTTGGC GGAGAAGGGG CGCATCAGGA CCCGCAGCTT CCAAGGGCGA
GGCGGCGGGA TCGAGGACCT GGAGTACGAC CTGCTGGGCG CGCCTTGCCA GGATGTGGTG
GGGAAAGCGC TTCGCATCCA CCCAAGCGGG GTCAGGGAGC TGTACCCGCT GCAGCGCATG
CTGCAAGATC TGGAGGCGGA GGGGTACGCC GGCTTACCGC TCAGGGACAG CCAGGGGAAC
GCGATCGGGA TCCTCGCCAT CTTGAGCCGC CGGCCGCTGG CCAACCTCCC CATCATCGGG
ACAGTGCTCC GGATCGCCGG CGCGCGGATG GCCCAGGAGC TGGAGGCGAT GAGCCACCTG
GAAGACCTGA ACCTCAAGGA CTTCACCATA GAGAACATCA ACGACGCCGT CTATTGGGTG
ACGCCGCAAG GAAGCATCTG GTACGCCAAC CATGCCGCCT CGGCCATGCT CGGCTACAGC
AGGGAGGAGT TTCTCTGCAT GGCGGTAGCG GAGCTGAACC CTGCCTACCC GATGGAAGTC
TGGAACGAGT ACTGGCAAGA GCTGAAACTG AAGGGGACCC TGCAGCTGGA GACGGCGCAC
CGGGCGAAGG ACGGCCGGAT GGTCCCGGTG GAGATCACCT CCAACTACTG CAGCTACAAC
GGGACCGAGT TCAACTGCGC CACGGTGAGG GACATTGCCG AGCGCAAGCA TATGGAACTC
GCGCTGGAGC ACCGGCTGGC GGTTCTGACC GAGCCGATGG TGAACCTGGC CCGGATTACG
GTGGAGGACC TCTTCGACCT GGAAGAGCTG CAGGCGATCC AGGACAGCTT CGCCGAGTCC
CACGGGGTAG CTTCCCTCAT CACCGACGCT CAAGGGCGTC CCGTCACCCG CCCCAGCAAT
TTCTGCGAAC TCTGCGAGGT GATACGCGGC ACCGAGGCCG GGCTTGCCAA CTGCAGGCAC
TCCGATGCCG CTCTGGTGGG GATGGACCGG TCCGGCCCCT GCCTGCAGCC CTGCCTGAGC
GGCGGGCTCT GGGACGGCGG CGCGGGGATA CACGTAGGCG GCTACCACGT GGGCAACTGG
CTGGTGGGGC AGGTGCTGGA CGAGTCCTGC GACCTTGAGC GCATGGTGCA GTACGCAGAC
GAGATTGGGG CCGATCCGGT GCGTTACCGC GACGCGCTCT CCCGGGTTCA GAGGATGTCC
AGGGAGCAGT TCGAGAAGGT ATGCCGCTCC CTGTTCCAGA TCGCCGGGCA GCTCTCCCGG
ATGGCGATCC AGAACGTGCA GCAGGCCCAG CATATCGCCG ACCGCGTCCG CAGCGAGGAA
CTGCTGCTGG AATACCGCAA GGTGATCGAG TGCTCCCAGG ACCAGATCTG CGTCATTGAC
CGCGACTACC GCTACCGGAT AGCCAACCGC TCCTTTTTGG AGTACCGGCG GATGAGCCTG
GATGAGGTGG TGGGGCGGAC CGTGGCGGAG GTGCTGGGTG AAGAGCTTTT CGCGGAGGTT
AAGCCGCAGG TGGATGAGTG TCTGGCAGGA AACGCGGTCA GCTTCGAGAT CGAGACCGAA
TCGGCGGAGC AGGGGGCGCG CTCACTGGCG GTGGCCTACA ACCCCATCGA GGACAAAAGC
GGCAGCATCC GCGTCGCTTG CGTCATCAGC GACCAGACCG AGAAGAAACA TCTGGGCGAG
CAGCTGAGGC AATCGCAGAA GATGGAGGCG GTCGGCCACC TGGCTGGCGG CATCGCCCAC
GACTTCAATA ACATCCTGAC CGTTATCGTC GGCTACGGGA ATCTCCTGGA GATGGACGGG
AGCCTGACCC CGCACCAGAA GGAGCAGGTG GAACAGATCG TGGCGGCCTC GGAGAGGGGG
GCGCAGCTTA CGCGCGGACT CCTTACCTTC AGCCGCAGGC AAATCATGAA CCCGTGCGTG
CTCGACCTGA ACGCGCTGGT GAACCAGATC CAGAAGTTCC TGTTGCGCAT CATCGGCGAG
GACATCCGAC TCCGTTTCAA TCCGCATCCC GACGCGCTCA ACGTCTGGGC CGATGCCAGC
CAACTGGAGC AGATCCTGAT GAACCTTGCC ACCAACGCCC GCGACGCCAT GCCCCAGGGC
GGCGGACTCT CCATCGAGAC GGGGGTGCAG GAGATCGACG AGGCGTACGC GCGTTCCCAG
GGGTACGGCA GCCCCGGACG CTACGCCTGC ATGATGGTGT CCGACACCGG CGAGGGGATG
GACCAGAAGA CCCGGGAGCG GATTTTCGAG CCCTTCTTCT CCACCAAAGT GGTCGGAAAG
GGGACCGGGC TCGGCATGTC CATCGTCTAC GGCATCGTCA AGCAGCACAA GGGGTTCATC
AACGTCTACA GCGAGCCGGG GGAAGGGACC GCCTTCAAGA TCTACCTGCC GCTGATCGAA
AGGGAAGCGG AGCAGGAGGC GCGCCCCTAC GCGAGCGATA TCCCGGAAAT GGGGTCCGAG
ACCATCCTGC TGGCGGAGGA CGATTCAGGG GTGAGGAGGC TGGTCGAATC GCTCCTGGAG
CAATACGGCT ATCGCGTCAT CCTGGCCGCG GATGGCAGCG AGTGCGTGCA GAAATATTTC
GATCACCGGG ACGAGATCTC GCTGATCCTG ATGGACGTGA TCATGCCCGG CAAGAACGGG
CGCGAGGCGT TCGAAGAGAT TCGTACCATC GACCCCAAGG CGAGGGTGCT CTACTCCAGC
GGTTACACCG CCGACTTTAT GAAGATCCGG GGCGTGTTCG AGGAGTCCGT CGACCTGGTC
ATGAAGCCGG TCCAGCCGGT GGCGCTATTG AAAAAGGTGA GAGAGGTGCT GGATCGGTGA
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| Protein sequence | MRRLTLLLAA FCFLLAASAA LGADSKARMI RVAAFNFYPC IFQQEGKVQG GFVDLIDEVA
RREGWKVEYL YGDWADGISR IKNGEVDLLT AVAWTPERSK FLDYSKTPLL TVWGELYVRR
QSQLSNLKEI QGKSVAVMKA DFNGASFRNM IDKFGISCRF VEYGNFEQIF DAVSSGKVDA
GVVNNTFGTA KQHQYGLASS GIIFNPFDIY LAAGKGENVQ VLAALDRYLA AWRAAEGSPY
HLALKRWSYG NAAALHVTPQ WLFPALIGCV LIWGAATAFI VLLRRQVNRK TREMARQAED
RLRIEETLFF INECGARQRE DELLAGICQY LCACLDTDYA FVGELLAEKG RIRTRSFQGR
GGGIEDLEYD LLGAPCQDVV GKALRIHPSG VRELYPLQRM LQDLEAEGYA GLPLRDSQGN
AIGILAILSR RPLANLPIIG TVLRIAGARM AQELEAMSHL EDLNLKDFTI ENINDAVYWV
TPQGSIWYAN HAASAMLGYS REEFLCMAVA ELNPAYPMEV WNEYWQELKL KGTLQLETAH
RAKDGRMVPV EITSNYCSYN GTEFNCATVR DIAERKHMEL ALEHRLAVLT EPMVNLARIT
VEDLFDLEEL QAIQDSFAES HGVASLITDA QGRPVTRPSN FCELCEVIRG TEAGLANCRH
SDAALVGMDR SGPCLQPCLS GGLWDGGAGI HVGGYHVGNW LVGQVLDESC DLERMVQYAD
EIGADPVRYR DALSRVQRMS REQFEKVCRS LFQIAGQLSR MAIQNVQQAQ HIADRVRSEE
LLLEYRKVIE CSQDQICVID RDYRYRIANR SFLEYRRMSL DEVVGRTVAE VLGEELFAEV
KPQVDECLAG NAVSFEIETE SAEQGARSLA VAYNPIEDKS GSIRVACVIS DQTEKKHLGE
QLRQSQKMEA VGHLAGGIAH DFNNILTVIV GYGNLLEMDG SLTPHQKEQV EQIVAASERG
AQLTRGLLTF SRRQIMNPCV LDLNALVNQI QKFLLRIIGE DIRLRFNPHP DALNVWADAS
QLEQILMNLA TNARDAMPQG GGLSIETGVQ EIDEAYARSQ GYGSPGRYAC MMVSDTGEGM
DQKTRERIFE PFFSTKVVGK GTGLGMSIVY GIVKQHKGFI NVYSEPGEGT AFKIYLPLIE
REAEQEARPY ASDIPEMGSE TILLAEDDSG VRRLVESLLE QYGYRVILAA DGSECVQKYF
DHRDEISLIL MDVIMPGKNG REAFEEIRTI DPKARVLYSS GYTADFMKIR GVFEESVDLV
MKPVQPVALL KKVREVLDR
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