| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2896 |
|---|
| Symbol | |
|---|
| ID | 6779749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3341500 |
|---|
| End bp | 3342048 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642768890 |
|---|
| Product | pyruvate ferredoxin/flavodoxin oxidoreductase |
|---|
| Protein accession | YP_002139695 |
|---|
| Protein GI | 197119268 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
|---|
| TIGRFAM ID | [TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0347102 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAGA GATATGAAAT CAGATTTTCC GGGGCTGGCG GGCAGGGTCT CATCCTTGCC
GGTGTCATCA TGGCCGAAGC CGCTTCCATC TACGACGGCA AGCAGGCAGT ACAGTCCCAG
AGCTACGGCC CCGAGGCAAG GGGTGGTGCA TCCAAGTCGG AGGTTATCAT CTCCGATACC
CTTATCGACT ACCCGAAGGC AACCGTGGTT GACGCGCTCT TGGCGCTGAC CCAGGAAGCC
GCCGACAAGT ACTCCCACGA CCTGAAGGAA GGCGGGGTAC TGCTGATCGA TTCGGACCTG
GTGAAGAGAG TGCCGGCGGG GAAATTCAAG ACCGTCGCCT TCCCGATCAT CAACACCGCG
AAGAACGAAG TCGGCCGCGA GATCGTCGCG AACATCGTGG CGCTGGGCGC CATGGTGGCA
CTGACCGAAG TCGTTACCAA GGAAGGCGCC GAGAAGGCAG TTCTCGCCCG CGTTCCGGAG
GCCTTCGTCG AGCTGAACAA GAAGGCGTTC CAGATGGGTT ACGAGAAGGC GATCGCTGCA
CGCGCCTAG
|
|---|
| Protein sequence | MSQRYEIRFS GAGGQGLILA GVIMAEAASI YDGKQAVQSQ SYGPEARGGA SKSEVIISDT
LIDYPKATVV DALLALTQEA ADKYSHDLKE GGVLLIDSDL VKRVPAGKFK TVAFPIINTA
KNEVGREIVA NIVALGAMVA LTEVVTKEGA EKAVLARVPE AFVELNKKAF QMGYEKAIAA
RA
|
|---|
| |