Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2892 |
Symbol | ispG |
ID | 6779745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3335590 |
End bp | 3336615 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642768886 |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | YP_002139691 |
Protein GI | 197119264 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAGGGA ATATCCCGGT TGGCGGAGGT GCTCCCTGCT CCGTCCAGTC CATGTGCTCA ACCGACACCC GTGATGTCGC GGCAACCCTT GGGCAGATCG GCCGGCTTGC CGCCGCCGGA TGCGAGATCG TGCGCTGTGC GGTGCCGGAT ATGGACGCCG CCCTGGCCCT TGCCGCCATA AAGGCCGGCT CCCCCATGCC GCTCATAGCC GACATACATT TCGACTACAA GCTTGCCTTG AAGGCCCTGG AGTCCGGGGT GGACGGGCTC CGTCTCAACC CCGGCAACAT AGGCGAAAAG TGGAAGGTTG CCGAGGTGGT GAAAGCCGCG GCCGAGCGCA ACGTTCCCAT CCGCATCGGC GTCAACGGCG GTTCGCTGGA AAAGGAACTG CTGGTGAAGT ACGGGCACCC GACTCCCGAG GCCATGGTCG AATCGGCGCT GGGGCATGTG CGGATCCTCG AGGAACTGGG CTATCAGCAG ATAAAGATAT CGATCAAGGT CTCCGACGTA TTGCGGACCC TGGAGGCGTA CCGGCTTCTT TCCGACGCCG TTGACTACCC TCTGCACATA GGCGTTACCG AGGCCGGAAC CATCTTCGCC GGAACCGTCA AGTCCTCCGT AGGTCTGGGA ATACTTCTTA ACCAGGGGAT CGGCGACACC ATGCGGGTCT CCCTCACCGG CGATCCGGTT GACGAGGTGC GGGTAGCGTA CGACATACTC AAATCGCTCG GTTTGCGGAC CCGCGGCATC AACTTCGTCT CCTGCCCCAC CTGTGGGCGT TGCCAGGTGA ACCTGATACC CGTAGCCGAG GAAGTAGAGC GGCGCCTGGC GCATCTGGAT ACAACGATCA CCGTCGCCGT CATGGGGTGC TCCGTCAACG GACCCGGCGA GGCTCGCGAG GCCGACTTCG GCATAGCCGG GGGTAGGGGA GAAGGGCTTC TCTTTCGGCA CGGCGAGATC CTGCGCAAGG TCCCCGAAGC CGAGCTAGCC GATGCCTTGG TGGAAGAAGT CTTAAAAAAT CAGTAG
|
Protein sequence | MIGNIPVGGG APCSVQSMCS TDTRDVAATL GQIGRLAAAG CEIVRCAVPD MDAALALAAI KAGSPMPLIA DIHFDYKLAL KALESGVDGL RLNPGNIGEK WKVAEVVKAA AERNVPIRIG VNGGSLEKEL LVKYGHPTPE AMVESALGHV RILEELGYQQ IKISIKVSDV LRTLEAYRLL SDAVDYPLHI GVTEAGTIFA GTVKSSVGLG ILLNQGIGDT MRVSLTGDPV DEVRVAYDIL KSLGLRTRGI NFVSCPTCGR CQVNLIPVAE EVERRLAHLD TTITVAVMGC SVNGPGEARE ADFGIAGGRG EGLLFRHGEI LRKVPEAELA DALVEEVLKN Q
|
| |