| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2867 |
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| Symbol | |
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| ID | 6779719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 3302498 |
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| End bp | 3303979 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642768861 |
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| Product | glutamate synthase, NADH/NADPH, small subunit |
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| Protein accession | YP_002139667 |
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| Protein GI | 197119240 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAAAC CAACCGGATT CATGGAATAT CTTCGCGAAC TCCCGTCGGA CCGCGAGCCG
CTGGAGCGGC TCAAAGATTG GGACGAGTTC CACCTGCACC TGCCGGAGGA GAAGCTCCGC
ACCCAGGGCG CCCGTTGCAT GGACTGCGGC ATCCCGTTCT GCCACACCGG GAAGCTGGTG
AGCGGCATGG CCTGCGGCTG CCCGGTCAAC AACCTGATCC CCGAGTTCAA CGACCTGGTC
TACCGCGGGC TTTGGAAGCA GGCGTACGAC AGGCTCTCGC GGACCAACAA CTTCCCCGAG
TTCACCGGCC GGGTCTGCCC CGCCCCGTGC GAGGGGTCGT GCACGCTGGG TGCCAGCGAG
CCTGCGGTCA CCATCAAGAA CATAGAAGTG AGCATCATCG AGCGCGCCTG GGACGAAGGG
TGGGTCACCC CTACCCTGCC GCAGGTCCGC ACCGGCAAGA AGGTGGCGGT CGTTGGCTCC
GGCCCCGCAG GGCTTTCCGC GGCCGAGCAG CTCAACAAGG CCGGGCACCA GGTGACCGTG
TTCGAACGGG CGCCGCTTCC GGGGGGGCTT TTGATGTACG GCATCCCCAA CATGAAGCTG
GACAAGCAAA ACATCGTCAT GCGCCGCATC CGGCTCATGG AGCAGGAGCA GATCGCCTTT
GTCTGCAACA CCAGCATCGG CGGGGCCGAT TACCCGGTCG AGAAGCTCAA GAGCGAGTTT
GACGCCGTGG TCATGGCTAC CGGCGCCACC CTCCCCCGCG ACCTCAACAT CGAGGGGCGC
TCGCTTCAGG GTATCCGCTT CGCCATGGAT TTCCTGACCG CCAACACCAA GGCGGTGCTG
GAAAAAGGGA GCAAGTTCAT CTCGGCGCAA GGGAAAGACG TGATCATCAT CGGCGGGGGC
GACACCGGCA CCGACTGCGT GGCCACCTCG CTGCGCCATG GCTGCAACTC CGTTACCCAG
CTGGAAATCA TGCCCCGTTC CCCCGACACC CGCGCCGATG ACAACCGTTG GCCGGAATGG
CCCAAGACCC ACAAGGTCGA TTACGGGCAG GAGGAGGCTG CGGCGAAATT CGGCGCCGAC
CCGCGCGTTT TCCTCACCAC CGCGACCAAG TTCGAAGGGG ATGCGGAGGG CAAGGTGAAG
GCGGTGCACA CGGTCCAGGT GAAATGGGAG AAGAACGCCC AGGGCCAGTT CGTCCCCACC
CCGGTGCCGG GGACCGAAGA GGTCCGGCCG GCAAGCCTCG TGCTGTTGGC TATGGGCTTT
CTGGGCCCCG AGCAGGAACT GCCGGCGGCA CTCGGGCTTG AGCGTGACGG GCGCAGCAAC
ATCAAGGCCG ACTACGGCCG CTACGCCACC AACATCCCCG GCGTGTTCGC AGCCGGCGAC
TGCCGCCGCG GCCAGAGCCT CGTGGTCTGG GCCTTCAACG AAGGACGCGG GGCAGCGCGC
GAGTGCGACC GTTTCCTGAT GGGAGACACC GAGCTTCCCT AA
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| Protein sequence | MGKPTGFMEY LRELPSDREP LERLKDWDEF HLHLPEEKLR TQGARCMDCG IPFCHTGKLV
SGMACGCPVN NLIPEFNDLV YRGLWKQAYD RLSRTNNFPE FTGRVCPAPC EGSCTLGASE
PAVTIKNIEV SIIERAWDEG WVTPTLPQVR TGKKVAVVGS GPAGLSAAEQ LNKAGHQVTV
FERAPLPGGL LMYGIPNMKL DKQNIVMRRI RLMEQEQIAF VCNTSIGGAD YPVEKLKSEF
DAVVMATGAT LPRDLNIEGR SLQGIRFAMD FLTANTKAVL EKGSKFISAQ GKDVIIIGGG
DTGTDCVATS LRHGCNSVTQ LEIMPRSPDT RADDNRWPEW PKTHKVDYGQ EEAAAKFGAD
PRVFLTTATK FEGDAEGKVK AVHTVQVKWE KNAQGQFVPT PVPGTEEVRP ASLVLLAMGF
LGPEQELPAA LGLERDGRSN IKADYGRYAT NIPGVFAAGD CRRGQSLVVW AFNEGRGAAR
ECDRFLMGDT ELP
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