| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2847 |
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| Symbol | |
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| ID | 6779699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 3277082 |
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| End bp | 3280351 |
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| Gene Length | 3270 bp |
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| Protein Length | 1089 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642768841 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_002139647 |
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| Protein GI | 197119220 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000851175 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATGA AAAAGTTTAA AGACTGGAAG ATCGGAACTA AGGTAATGAG CATCTCCGTA
GCGATGATCG TCATGATCAC TGCCATAAAC TTCCTCTATC TGATGCCGGT ACTGCAAAAA
GAGATATTGG AAGAAAGAGA GGCTACCATC AGGTCGGTGG TGGATCTCCC CTACGAGTTG
ATCGCCGAAT ACCAACAAAG ATTCGAAAAA GGGGAGTTCA CCCTTGAGGA AGCGCAAAAA
CGCGCCAAGG ATCGCATCAG GGTCATGCGT TACGACCAGA AAGAGTACTT CTGGATCACC
ACGGTGGATG CCGGAATGCT CTTGCACCCC CTCAAGCCCG AACTGGAAGG GAAGGATCAA
AGCGGGGTCA AGGATCCCCA AGGCAAGGCC ATTTTCGTCG AAATGGCCAA CGTCGCCAAG
GCCCAAGGAT CCGGGCTGGT CAGCTACATG TGGCCCAAGC CGGGCGAAAC GGCCTCCACG
GAGAAGATCG CCTACGTCAA ACTCTACAAG CCATGGGGTT GGGTGGTCGG AAGCGGCCTG
TACGTAGACG ACATGAATGC GGTGATAGCC GTCATGCGCT GGAAGCTCGC GGCCATGACG
CTCGTTTTCG CCCTCGTGGC GCTCGCCCTC GGCTACCTTA TTTCCTCCCG CATCAGCAAG
AACATCGGCC AGGTGATCCA TGCGGCCGAT GCGCTTGCCC TTGGCGACGT CAAGGTCGAG
ATAAAGGCCG ACTGCGAGGA TGAAACCGGG ATGCTCGCCG AAGCCTTCGG CAAGATGATC
GGCAACGTCG CCGAAGCGGC CAAGGCTGCG GAGCGAATAG CCAACGGCGA CGTCGGCTTC
GAACTTGCGG TGAAGTCGGA CCAGGACGTC CTCTCCAAAA ACCTGAACAT CACCATTGCC
GCGGTAAAAG CGATGGCCAA GGACGCAGAC CTCTTGGCCA AGGCCGCAGT CGAGGGAAAA
CTTTCCTTGC GCGCCGACGC CTCGCAGCAC CATGGCGAAT ACAAAAAGAT CATCGACGGC
TTCAACGCAA CCATCAACAG GCTGGTGGGG CTCCTCGACA ACATGCCGGC ACCGGCCATG
ATCGTCGATA ACGACTTTAC CGTCTTATAC ATGAACCAGA TCGCGGCGCA GGTGGGAGGG
AAAATACCGG CGCAGGTTGT GGGGACGAAA TGCCACGACC ACTTCAAGAC CTCCGACTGC
AAGACCGGCA ACTGCGCCTG CGGCAAGGCC ATGCAAAGCG GGGCCGTGGC CAACAGCGAG
ACCGATGCGC ATCCGGCTGC GGGCGTCGAC CTCGAGATCG CCTATTCTGG CACTCCGCTT
CGCGACGATG CGGGGCGGGT CGTCGGCGCC TTCGAGGTGG TTTCAGACCA GACGGCGATC
AAGAACGCGG CACGACTGGC GAAGAAGATC AGCGACTACC AGGACAACGA AACGAATAAA
CTGGTCCACG GGCTTGAGAA GCTGGCCAAG GGGGACATGG AGTTCGAAAT CAGGACGGAG
GCAGCGGACC AGGACACCAA GGAAGCCAGG GAGATCTTCG AGTCGCTCGC CGGCGCCGTC
AACAGCTGCG CGGGCGTCAT CAGGACCCTC AATTCGGACG CAGGAACGCT GGCGCAGGCA
GCCAAGGAGG GACGCATCAC CGCCCGCGCC GACGCAGACA AGCACCAGGG TGCCTACAAG
CAAATCGTAC AGGGCGTGAA CGACAGCATG GCCACCATGG TGGGCTTCCT GGACAACATA
CCCAGCCCCG CGATGATTAT CGACCCGGAT TACAACGTAC TGTACATGAA TCCTTTGGGT
GCCAAGGTCG GCGGCAAAAC GCAGGCACAG GTCCATGGCA CCAAGTGTTA CGACCATTTC
AAAACCAGCG ACTGCAAAAC GGCCAACTGC GCCTGCGCCC AGGCGATCGC CGGAGGGCAC
GAGGCGACCA GGGAAACGGA CGCACACCCG GGCGGGCTCG ACCTGGACAT CTCCTACACC
GGCGTCCCGA TCAAAGACGC TGCCGGAAAG GTAGTCGGGG TATTCGAAGT GGTGACCGAC
CTCACCTCGG TCAAACAGGC GGCCCGACAG GCGCAGAAAA TCTCGGATTA CCAGAACAAC
GAAACAAGGA AACTGGTCGA AGGCCTGGAC AAGGTCGCCA AAGGGGACGT CACGATAACG
CTTGAAACGG AACCTGCCGA CGCCGACACG AACGAGGCCA AACGCACTTT CGACACCATC
GCCGCCGCCG TGAACAGCTC GGTCGAGGCG ACAAGGCATA TCGCCGAGGC TGCCAAGCTG
ATCGCTGGAG GAGATCTCAC CGTCGAGATA AAAGAGCGCT CCCCCGAGGA CAGACTGATG
ATGGCCCTGA AAGCGATGGT GCAGAAGTTA AGCGAGGTGG TGACGGATGT GAAAGGAGCA
GCCGACAACG TCGCTGCGGG AAGCCAGGAA CTCTCCTCGA GTTCGGAGAT GATGTCGCAA
GGTGCGAGCG AGCAGGCTGC CGCCGCGGAA GAGGTATCTT CCTCGATGGA AGAGATGTCC
TCCAATATCA GGCAAAACGC CGACAACGCC CTTCAGACCG AAAAAATCGC CTCCAAATCC
GCCAAGGATG CCGAAGAAGG GGGCAAGGCG GTCGACCACA CCGTCAACGC CATGAAGGAG
ATCGCCGGGA AGATCTCCAT CATCGAGGAA ATCGCACGGC AGACCAACCT CCTCGCCCTG
AACGCGGCCA TCGAGGCGGC GCGCGCCGGC GAGCACGGCA AGGGGTTCGC GGTCGTGGCA
TCGGAAGTGC GCAAACTGGC CGAGCGAAGC CAGAGGGCTG CGGCGGAAAT CTCCGGGCTC
TCCGCAAGCA GCGTGGAGAT CGCGGAGAAG GCCGGTCAGA TGCTGAATCA GATGGTCCCC
GACATCAAGA AGACGGCGGA ACTGGTGATG GAAATCAGCG CCGCCTGCCG CGAGCAGGAC
ACCGGCGCAG AGCAGATCAA CAAGGCCATC CAGCAACTCG ACCAAGTCAT TCAGCAAAAC
GCCTCGGCAT CGGAGGAGAT GTCCTCCACC GCGGAAGAGC TTTCCACCCA GGCGGAACAA
CTCCAGGAAG CGATCGGTTA TTTCAAGGTG ACGGGAATGC GGGAAACGGC GAAAAGGCAA
GCGGAGATGC CTTTGCGGCA GGCCGCAGCC AAACCGGCCA AGAAGAAGCT GAGCCAGGCA
GGAACCCCGC CCGCAGAGAA GCGCAAGATA GCAGCAGGTG GACTGTCGCT GGAGTTGGAT
CAGGAAGATG GCGAATTCGA ACGTTTCTAG
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| Protein sequence | MKMKKFKDWK IGTKVMSISV AMIVMITAIN FLYLMPVLQK EILEEREATI RSVVDLPYEL
IAEYQQRFEK GEFTLEEAQK RAKDRIRVMR YDQKEYFWIT TVDAGMLLHP LKPELEGKDQ
SGVKDPQGKA IFVEMANVAK AQGSGLVSYM WPKPGETAST EKIAYVKLYK PWGWVVGSGL
YVDDMNAVIA VMRWKLAAMT LVFALVALAL GYLISSRISK NIGQVIHAAD ALALGDVKVE
IKADCEDETG MLAEAFGKMI GNVAEAAKAA ERIANGDVGF ELAVKSDQDV LSKNLNITIA
AVKAMAKDAD LLAKAAVEGK LSLRADASQH HGEYKKIIDG FNATINRLVG LLDNMPAPAM
IVDNDFTVLY MNQIAAQVGG KIPAQVVGTK CHDHFKTSDC KTGNCACGKA MQSGAVANSE
TDAHPAAGVD LEIAYSGTPL RDDAGRVVGA FEVVSDQTAI KNAARLAKKI SDYQDNETNK
LVHGLEKLAK GDMEFEIRTE AADQDTKEAR EIFESLAGAV NSCAGVIRTL NSDAGTLAQA
AKEGRITARA DADKHQGAYK QIVQGVNDSM ATMVGFLDNI PSPAMIIDPD YNVLYMNPLG
AKVGGKTQAQ VHGTKCYDHF KTSDCKTANC ACAQAIAGGH EATRETDAHP GGLDLDISYT
GVPIKDAAGK VVGVFEVVTD LTSVKQAARQ AQKISDYQNN ETRKLVEGLD KVAKGDVTIT
LETEPADADT NEAKRTFDTI AAAVNSSVEA TRHIAEAAKL IAGGDLTVEI KERSPEDRLM
MALKAMVQKL SEVVTDVKGA ADNVAAGSQE LSSSSEMMSQ GASEQAAAAE EVSSSMEEMS
SNIRQNADNA LQTEKIASKS AKDAEEGGKA VDHTVNAMKE IAGKISIIEE IARQTNLLAL
NAAIEAARAG EHGKGFAVVA SEVRKLAERS QRAAAEISGL SASSVEIAEK AGQMLNQMVP
DIKKTAELVM EISAACREQD TGAEQINKAI QQLDQVIQQN ASASEEMSST AEELSTQAEQ
LQEAIGYFKV TGMRETAKRQ AEMPLRQAAA KPAKKKLSQA GTPPAEKRKI AAGGLSLELD
QEDGEFERF
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