Gene Gbem_2805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2805 
Symbol 
ID6782804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3234130 
End bp3235566 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content62% 
IMG OID642768799 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_002139605 
Protein GI197119178 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR01818] nitrogen regulation protein NR(I) 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.228775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCA ACAACATATT GGTTGCCGAC GACGAAGAGA GCATGCGCTG GGTCCTTTCC 
AAGGCGCTCA GGAAAAAAGG CTTCAACGTG GAGCTCGCCC GCGACGGCAA CGAGGCTCTC
AGGCTGATTA AGGAGAACGT CTACGACCTG GCGCTTTTGG ACATCAAGAT GCCGGGGATG
ACGGGGCTCG AACTGCTAGA CCGGGTGAAG GAGGAGCGCA GCGACCTCTT CGTCGTGATC
ATGACTGCCG AGGCGAGCAT GAAAAACGCG GTCGAGGCGA TGAAGCGCGG CGCCTACGAT
TACCTCACCA AGCCCTTCGA CCTCGGGGTG ATCGACGCGG TGGTCGAGAA GGTGAGCCGG
GCGCGCGAGA TGACCAGCCA GGTCTCGCTC CTCAAGGAAG AGCTCAAGGA CCGCTACCAG
CTGGAGAAGA CCATCATCGG CAACTCCCCG GCCATGAGGG AGGTCTACAA GACCATCGGC
AAGGTGGCTC CCAGCGACGT GACGGTGCTG GTGCAGGGCG AATCGGGGAC GGGAAAGGAG
CTCATCGCCC GCGCCATCCA CTACAACTCA AAGCGTCTGG GCAAGCCCTT CATACCGCTC
AACTGCGCCG CCATCCCCAA GGAGCTTCTG GAGAGCGAGC TCTTCGGTTT CGAGAAAGGG
GCCTTCACCG GCGCCACCGA GAGGAAACTC GGCAAGTTCG AGCAGGCCAA CGGCGGCACC
ATCTTCCTGG ACGAGATCGG AGACATGCCG CTCGACTTGC AGGCCAAGAT CCTGAGGGTG
CTGCAGGAGC GCGAGATCAC CAGGACCGGC GGAAACCAGA GCATCCCGGT CGACGTCAGG
GTGGTCGCTG CGACCAACCA GGACCTCGAA GAGAGCGTGC ACAACAAGCA GTTCCGCGAG
GACCTCTACT ACCGGTTGAA CGTGATACCG ATCCATCTGG TGCCGCTCAG GGACAGGAAG
GAGGACGTGC CGCTTCTGGT GCAGTACTTC CTCACCAAGA TCTGCGCCGA GCTCGAAGTG
CCGCAAAAGC GCTGCTCCGC CGACGCCATC AAGCTCCTGA CCAACTACAG CTGGCCCGGC
AACATCCGCG AGCTGGAAAA CACCATCAAG AGGGGCGTCA TCCTCTCGCC GGACCCACTC
CTGGTCGCCT CCGATTTCCC GGGGCTGCGC AACCGCCAGA GCGAGGGCAA AGGGGAGGAG
CTTTCCCTGG AGGGGATCGT CGACCTGAAG CTGCGCGGCT GCTTCAGCAA CATGGAGAAG
ATGGAGAGCG GCGACGTGCA CGCCATGGTG CTGGAACAGG TGGAGCGGCC GCTGATCCGC
TTCGTCCTGG AGAAGACCCG CGGCAACCAG GTCCGCGCCG CCGACATCCT CGGCATCAAC
CGCAACACCC TGAGAAAGAA GATCACCGAG CTCGGCATCG AGCTGCGCAA GGAATAG
 
Protein sequence
MSINNILVAD DEESMRWVLS KALRKKGFNV ELARDGNEAL RLIKENVYDL ALLDIKMPGM 
TGLELLDRVK EERSDLFVVI MTAEASMKNA VEAMKRGAYD YLTKPFDLGV IDAVVEKVSR
AREMTSQVSL LKEELKDRYQ LEKTIIGNSP AMREVYKTIG KVAPSDVTVL VQGESGTGKE
LIARAIHYNS KRLGKPFIPL NCAAIPKELL ESELFGFEKG AFTGATERKL GKFEQANGGT
IFLDEIGDMP LDLQAKILRV LQEREITRTG GNQSIPVDVR VVAATNQDLE ESVHNKQFRE
DLYYRLNVIP IHLVPLRDRK EDVPLLVQYF LTKICAELEV PQKRCSADAI KLLTNYSWPG
NIRELENTIK RGVILSPDPL LVASDFPGLR NRQSEGKGEE LSLEGIVDLK LRGCFSNMEK
MESGDVHAMV LEQVERPLIR FVLEKTRGNQ VRAADILGIN RNTLRKKITE LGIELRKE