Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2631 |
Symbol | |
ID | 6782628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 3047424 |
End bp | 3048971 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642768626 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_002139435 |
Protein GI | 197119008 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.383083 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGCG CTGAAGAAAA GATTGTAAAC AAGTGGCTCA TCACCATCAC GGTGATGCTG CCGGCGATCA TGGAGATCGT CGATACCTCG GTCGCGAACG TGGCGCTCCC GCACATGCAG GGGAGCCTCA ACGCCGGGAC CGATGAAATC ACCTGGGTCC TCACCTCCTA CCTGGTCAGT AACGCAGTCG TCCTCCCCAT GACCGGGTGG CTCGCCCGCA TGTTCGGGCG CAAAAGGTTC CTCATCACCT GCATCACCCT CTTCACCCTC GCCTCGCTTC TTTGCGGCGC CGCCCCTTCT CTGGGCATGC TGATCTTCTT CCGCGTCTTG CAAGGGGCCG CCGGCGGCGC CCTCATCCCC ATGAGCCAGG CGATCATGAT GGAAACCTTC CCCCCCTATC AACAGGGAAT GGCGATGGCC ATCTTCGGCG TAGGCGCCAT GTTCGGCCCC ATCATCGGCC CGGCGTTGGG CGGCTGGATC ACCGACAACA TGAGCTGGCG CTGGATCTTC TACATCAACA TCCCCATCGG GGTCATCGCG GTCATCATGG CTTCCTTCTT CATCTACGAC CCGAGCTACC TGAAACGTAC CAAGGTCGCC ATCGACTACT GGGGGCTCGC CCTTCTCACC GTGGGGCTGG GAGCCCTGCA GATAGTGCTC GACAAAGGGC AGCAGGACGA CTGGTTCAAC TCCCCTTTCA TCGTCGGCTG CGCAGTGGTC ACAGCAATCG CGCTTTCCGC CCTTGTTTAC GTCGAATTGA CCCACCCGCA TCCCATCGTG AACCTGAGGC TCTTCAAGAA CGTCTCCTTC TCGTCGGGGA ACCTGATCAT GTTCGCCGTG GGATTCTGCC TTTACAGCTC CATCATGCTG ATCCCGCTGT TCCTGCAGAC CCTCATGGGT TACAACGCCA CCATGGCCGG CATGGTCCTC GCTCCGGGCG GCGTCGCCAC CCTCATCTGC ATGCCATTCG TGGGAGCGGC GATCCAGCGC TACGACGGCA GGAAGGTCGT TTTCATGGGG CTTATCATCG GGGCTACTTC CATGTTCATC ATGCAGCGTT TCACCCTGCA GGCGGCCTAC ATGGACTTCG TCTGGCCTCG GGTGGTGCTG GGCGTGGGCC TTGCCATGAT CTTCGTGCCC CTGACCACGG TCACCCTGGC AACCATTTCC AAAGAAGAGA TGGGGAACGC GACCGGCATC TTCAACCTGC TCAGAAACAT CGGCGGGAGC GTCGGCATAG CAATCGCGGC CACCATGCTG GCGCGTTACT CGCAGTTTTA TCAGACCAAC CTGGTCGCAC ACGTAAACCC GTACAACCCG CTGTTCCAAT CCCAGCTCGC GACGCTGAAG GGGGCGCTCA TGGGGCGCGG CCTCGATCCT GTCGCTGCCG AGAAAGGGGC CATGACAGTA CTTTACGGGA CCGTAAGCCG GCAGGCCTAC ATGCTCTCCT ACAACAGGAT CTTCTTCATC GTCGGCTTGG CGTTCCTCAT CATCATTCCG CTTTTGTTTC TGTTGAAAAA GCCCGCCAAG CACCTGCCGC CGGCGTAA
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Protein sequence | MKSAEEKIVN KWLITITVML PAIMEIVDTS VANVALPHMQ GSLNAGTDEI TWVLTSYLVS NAVVLPMTGW LARMFGRKRF LITCITLFTL ASLLCGAAPS LGMLIFFRVL QGAAGGALIP MSQAIMMETF PPYQQGMAMA IFGVGAMFGP IIGPALGGWI TDNMSWRWIF YINIPIGVIA VIMASFFIYD PSYLKRTKVA IDYWGLALLT VGLGALQIVL DKGQQDDWFN SPFIVGCAVV TAIALSALVY VELTHPHPIV NLRLFKNVSF SSGNLIMFAV GFCLYSSIML IPLFLQTLMG YNATMAGMVL APGGVATLIC MPFVGAAIQR YDGRKVVFMG LIIGATSMFI MQRFTLQAAY MDFVWPRVVL GVGLAMIFVP LTTVTLATIS KEEMGNATGI FNLLRNIGGS VGIAIAATML ARYSQFYQTN LVAHVNPYNP LFQSQLATLK GALMGRGLDP VAAEKGAMTV LYGTVSRQAY MLSYNRIFFI VGLAFLIIIP LLFLLKKPAK HLPPA
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