| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2534 |
|---|
| Symbol | |
|---|
| ID | 6782531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 2934457 |
|---|
| End bp | 2935833 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642768529 |
|---|
| Product | response regulator receiver sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002139338 |
|---|
| Protein GI | 197118911 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTGC TCGTCGTTGA CGACAACAGT AATGATCGAA AACTGTTGCG CTTAACCCTG
GAGCACCACG GTTTTGAGAC CATCTGGGAA GCCAGCAACG GCGAGGAGGC CTATGAGACG
GCTCAGATCA ACAAGCCGGA CCTGATCATC TCGGACGCCT TGATGCCGCG GATGGATGGA
TTTCAGTTCC TGCGTCTGAT CAAGATGGAA CCGGAACTCA AAGACATCCC GTTTATCTTC
TACTCCGCCG TCTATACCGG CTACAAGGAA GAGGAACTGG CCCTCTCGCT CGGTGCCGAG
ACTTTTATCG TTAAGCCGAA GGAGCCGGAA GAGTTGTGGA ACCTCATTGC TGCCGTCCTG
GAGAAACTAT CGGCAGGGAA AAAAGCAAGC CAGTACGTTG AGCCCGTGGA AGAGGAAAAG
CACTTCCTCA AAAAGTATGA CGAAATCGTA ACGGCGAAGC TCGAGGAGAA GGTCGGGGAG
CTTCAAGACG CTCTGACCCG TCTTAAGGAG GCCGAAGCGG TCTTATTAAA AACAAATGAA
GAGTTGGAAA AACGGGTCGC CGGGCGGACC AGGGAACTGG AAATAAATCG TTCGGAACTT
GCCGCGCAAA ACGTGGAACT GTCGAAAACC TATCACGATT TGGAGACTCA AACGGCGGAA
CGGATCCGGG CGATGGAAGA ACTCCGGGAA AAGGACCAGA TGCTGACTCA GCAGAGCCGA
GTGGCGGCGA TGGGTGAGAT GCTGAGCAAC ATTGCCCATC ACTGGCGCCA ACCGCTCAAC
GTCGTCGCAC TGAAGCTTCA GGAACTGGAA ATGGTCAAGG AATTGGACCA TGAATTCCTT
GATGCCAACG TCGGCGAAGC CCTGAAAATC ATCTTTCAAT TGTCCAAGAC TATCGATGAT
TTCCGTGTTT TCTCTGCTCC CGACACACAG AAGTCATTGT TCAATGTGGA ACAGATTATA
GCGAAAGCAG TTTCTTTCAT AGAAGAAAGT TTCAAGGAAC AGCAAATTGC CATAGATGTC
AGTTCAACTG GTCAACCTCA AGTTGACGGG TATTCAAACG AATTTGGTCA GGTGATCTTG
AACATACTGT TGAACGCCAG GGATACCATT TTTGAGAGAC GGACGCTCAA TGCCCGGGTT
GCCGTGCGTT CATGGACAGA AAATGGCAGG GTAGTAGTAA CGATTACCGA CACAGCCGGA
GGCATCGAGG AAGGAATCAT CGGTAAAATA TTTGACCCCT TTTTTACAAC CAAAGCCCAG
GGGAAGGGAT CCGGGGTCGG TCTGTTCATG TCCAAAACGA TCATCGAGAC AAAAATGGGG
GGGCGTTTAA CCGCTCGGAA TGTCAACGAC GGTGCAGAGT TCAGGATCGA GATCTGA
|
|---|
| Protein sequence | MKLLVVDDNS NDRKLLRLTL EHHGFETIWE ASNGEEAYET AQINKPDLII SDALMPRMDG
FQFLRLIKME PELKDIPFIF YSAVYTGYKE EELALSLGAE TFIVKPKEPE ELWNLIAAVL
EKLSAGKKAS QYVEPVEEEK HFLKKYDEIV TAKLEEKVGE LQDALTRLKE AEAVLLKTNE
ELEKRVAGRT RELEINRSEL AAQNVELSKT YHDLETQTAE RIRAMEELRE KDQMLTQQSR
VAAMGEMLSN IAHHWRQPLN VVALKLQELE MVKELDHEFL DANVGEALKI IFQLSKTIDD
FRVFSAPDTQ KSLFNVEQII AKAVSFIEES FKEQQIAIDV SSTGQPQVDG YSNEFGQVIL
NILLNARDTI FERRTLNARV AVRSWTENGR VVVTITDTAG GIEEGIIGKI FDPFFTTKAQ
GKGSGVGLFM SKTIIETKMG GRLTARNVND GAEFRIEI
|
|---|
| |