Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2446 |
Symbol | |
ID | 6782443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 2835744 |
End bp | 2838242 |
Gene Length | 2499 bp |
Protein Length | 832 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642768441 |
Product | glycogen/starch/alpha-glucan phosphorylase |
Protein accession | YP_002139250 |
Protein GI | 197118823 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0058] Glucan phosphorylase |
TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00073927 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAG ATCAAATGGG CTTGAACGAA ACCCTTGACC AGAAGATGCT CATTATCAAA TCCTTTCTTG AGCATTTGGA ATACACCTTG GGTAAGGACA AGTACTCCGC TACGAAGTAC GACAGATTCA ATGCTTTAGC CTATGCCGTG CGCGACAAAC TGGTTGAGCG ATGGCTTGAC ACCCAGCAGG CATATTACAA CTCCGACAAC AAGCGAGTCT ACTATATCTC GATGGAATTC CTGATGGGGA GAACCCTGGG AAACAGTCTC ATCAACCTGG GGATGTGGGA CGATTTCCAG GAAGCGCTCG ACTCGCTGGG CGAGAACTAC TTTGAGGAGA CCCTCGACGA GGAACAGGAC GCGGGGCTCG GCAACGGCGG CCTGGGAAGG CTCGCCGCCT GTTTCCTCGA CTCCATGGCC ACCATGTCCA TACCCGCCTA CGGATACGGC ATCCGCTACG AGTACGGCAT TTTCCGCCAG CACATAGCGG ACGGCGCCCA GATGGAGATC CCCGACAACT GGCTGCGCTA CAGAAACCCC TGGGAATTGG ACCGCCAGGA GCACCTGCAC ACAGTTAAAT TCTACGGGCG CGTCATCACC ACCTTCGATA AAAACGGCAG GCTCCTGCGC GAGTGGGTCG ACACCGAAGA CGTCATGGCC ATGGCCTTCG ACACCCCCAT CCCCGGCTAC CAGACCCACA GCGTCAATAC GCTGAGGCTT TGGACCGCCA AATCCAGCCG CGAATTCGAC CTGAAGTTCT TCAACGAGGG GAACTATATC CGCGCCGTGG AAAAGAAGAT GCAGTCGGAG ACCATCTCCA AGGTCCTCTA CCCTGCAGAC AACGTCATCG AGGGAAAGGA GCTCCGCTTC AAGCAGGAAT ACTTCCTCGC CTCGGCCACG GTGCACGACG TGATCTACCG CTTCAAGAAG AAGCACTCGG ACATGAAGAA GCTCCCGGAA AAGGTGGCCA TCCAGTTGAA CGACACCCAC CCCACCCTCG CCATCCCGGA ACTGATGCGG GTCCTGATCG ACCTGCACAA CATGGAATGG GAGGACGCCT GGGACATCAC CAGGAAAACC TTCGCCTATA CCAACCACAC CATACTCCCC GAGGCGCTGG AGCAGTGGCC GGTCTGGTTT TTCGAGCAGA TACTCCCCCG GCACCTGCAG ATCGTCTACG AGATCAACGA GTATTTCCTG AAGGAGATCC GAGAGCGCTT CCCCGGCGAC GCGGAAAGGC TCTCCCGCAT GTCCATCGTG GAAGAGCACT GGGAAAGGAA GATCCGCATG GCGCATCTCG CCATAGTCGG GAGCCACTCG GTGAACGGCG TCGCGGCGCT GCACACCGAG ATCCTGAAAA ACGAACTTTT CCGCGACTTC TACGAGATGT ACCCGGAGCG GTTCAACAAC AAGACCAACG GGATCACGCA AAGGCGTTGG CTCAAGATGA GCAACCCGCT GCTCTCATCG CTGATCGACG ACTACATCGG CTCAGGGTGG ACCAGAAACC TATACGAGCT GGAAAAGCTG CGCGCCATTG CCTCCGACCC GGAGTTCCTG GAGCGCTGGC AGCAGACGAA GCGGCGCAAC AAGGAGAGCC TTTGCCGCTA CATCCTGCAG CATAACCAGA TCGAGGTGGA TCCTGAGTCG CTCTTCGACG TGCAGGTGAA GCGGATCCAC GAGTACAAGC GCCAGCTTTT GAACGTTTTG CACATCATCA CCCTGTTCAA CCGGATCAAG GACAACCCGA AGGCCGACGT GGTGCCGCGC ACCTTCATCT TCGCCGGCAA GGCCGCACCG GCCTACGCCA CCGCCAAGCT GATCATCCGG CTCATCAACG CGGTCGCCGC CGTGGTGAAC CGCGACCCGG ACGTGGCGGG AAGGATCAAG GTGGTCTTCC TTGCCAACTA CGGCGTCACC CTGGCCGAGA AGATCTTCCC AGCTTCAGAC CTCTCCGAGC AGATCTCCAC CGCGGGCACC GAAGCGTCGG GGACCGGCAA CATGAAGTTC GCACTGAACG GCGCGCTCAC CATCGGGACC CTGGACGGCG CCAACATCGA GATCATGGAG GAGGTGGGGA GGGAGAACAT CTTCATCTTC GGCATGACCG CAGCGGAAGT GGCGGAGCTG CGCGCCCGCG GCTACAACCC GCGCGAGTAC TACAACAACA ACCGCGAACT GCGCCGTGTC TTGGACATGA TCGCCTCGGG GTACTTCTCC CCCTGGGCTC CCGAACTCTT CACCCCGCTC ACCGAATCGC TTTTGAACCT GGGGGACCAC TACATGCTGT TAGCCGACTA CGCAGCCTAC GTTGCCTGCC AGCAGGAGGT GGGAGAGCTG TTCCGCCGCA AGGACGAGTG GGCCCGGCAG GCCATCCTCA ACTGCGCCGG CATGGGCAAG TTCTCCAGCG ACCGGACCAT AGACCAGTAC GCCCGCGAGA TCTGGGGGAT CAAGCCGGTG GACATCCTTC CCGGTGCCGT AGAGCTGCAG AGGCATTGA
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Protein sequence | MTEDQMGLNE TLDQKMLIIK SFLEHLEYTL GKDKYSATKY DRFNALAYAV RDKLVERWLD TQQAYYNSDN KRVYYISMEF LMGRTLGNSL INLGMWDDFQ EALDSLGENY FEETLDEEQD AGLGNGGLGR LAACFLDSMA TMSIPAYGYG IRYEYGIFRQ HIADGAQMEI PDNWLRYRNP WELDRQEHLH TVKFYGRVIT TFDKNGRLLR EWVDTEDVMA MAFDTPIPGY QTHSVNTLRL WTAKSSREFD LKFFNEGNYI RAVEKKMQSE TISKVLYPAD NVIEGKELRF KQEYFLASAT VHDVIYRFKK KHSDMKKLPE KVAIQLNDTH PTLAIPELMR VLIDLHNMEW EDAWDITRKT FAYTNHTILP EALEQWPVWF FEQILPRHLQ IVYEINEYFL KEIRERFPGD AERLSRMSIV EEHWERKIRM AHLAIVGSHS VNGVAALHTE ILKNELFRDF YEMYPERFNN KTNGITQRRW LKMSNPLLSS LIDDYIGSGW TRNLYELEKL RAIASDPEFL ERWQQTKRRN KESLCRYILQ HNQIEVDPES LFDVQVKRIH EYKRQLLNVL HIITLFNRIK DNPKADVVPR TFIFAGKAAP AYATAKLIIR LINAVAAVVN RDPDVAGRIK VVFLANYGVT LAEKIFPASD LSEQISTAGT EASGTGNMKF ALNGALTIGT LDGANIEIME EVGRENIFIF GMTAAEVAEL RARGYNPREY YNNNRELRRV LDMIASGYFS PWAPELFTPL TESLLNLGDH YMLLADYAAY VACQQEVGEL FRRKDEWARQ AILNCAGMGK FSSDRTIDQY AREIWGIKPV DILPGAVELQ RH
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