| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2300 |
|---|
| Symbol | |
|---|
| ID | 6782296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 2671515 |
|---|
| End bp | 2672411 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642768296 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_002139108 |
|---|
| Protein GI | 197118681 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCCAA AACACTACGG CGCCTGGTTG ATCGCCGCCT CCGCAGCAGG TTTTGCTACC
CTCGGCATCC TCATCAAGAG CGCCTTTTCC GGCGGCGCCA ACATCACCAC GGTACTTGCC
GGGCGGTTCC TGGTAGCGTC GTTTTTTCTG TTCATCTATC TCAGGGTGCG CAAGACCCCG
CTTGTCATCG GGCGCAAATC CTCGCTGCAA CTGCTGCTCA TGGGAATGAT CGGCTACGGC
GGCATGTCCA TGCTCTACGC CAACGCCATC CACTACCTCC CAGCGTCCCT GACCGGGATG
CTTCTTTACA CCTACCCGGC GCTCGTCACC GTCATCGCGC TGATCGTGGG TGAAGAGCGC
TTCAACGCCG CCAAGGGTGT GGCGCTGGTG GTCTGCAGTG CCGGTCTGGT GCTGCTATTG
GGTGCCTCGT TCGATGGCGC GCGGCTGGAG GGAGTACTCT GCACTTTGGG GGCGGCCGGG
ATTTACAGTT GTTACATCAT CATCGGCAAC CGGATTCTAA AGGACATCGA CCCGCTGGTC
ACCTCATTGT GGGTCTGTGC CTCCGCAGGA TTTACCTTTC TCTTCTATGG TGTCGCTACC
GGCGGCCTCA CCCTGGACCT CGCGCCCGTT GGGTGGCTTT CCATCCTGGG GATCGCCCTG
TTCCCAACGC TAATTGCGGT CGTCGGTTTC TTTGCCGGGC TACGCTACGT CGGCGCCACC
AACGCCTCCA TCATCAGCAT GCTTGAGCCG TTGATCACCG TGCTTTTATC GGCGCTTCTT
CTGGGGGAGC GGATCACCGC GCTGCAAGGT TTCGGCGGAG CGGTCCTTTT ATTCGGCGGC
CTTATCCTGC AGCTCTGGGG AAACGAAGCG CGTCGCGAGA CGGTCATCGA AGTCTAA
|
|---|
| Protein sequence | MSPKHYGAWL IAASAAGFAT LGILIKSAFS GGANITTVLA GRFLVASFFL FIYLRVRKTP
LVIGRKSSLQ LLLMGMIGYG GMSMLYANAI HYLPASLTGM LLYTYPALVT VIALIVGEER
FNAAKGVALV VCSAGLVLLL GASFDGARLE GVLCTLGAAG IYSCYIIIGN RILKDIDPLV
TSLWVCASAG FTFLFYGVAT GGLTLDLAPV GWLSILGIAL FPTLIAVVGF FAGLRYVGAT
NASIISMLEP LITVLLSALL LGERITALQG FGGAVLLFGG LILQLWGNEA RRETVIEV
|
|---|
| |