| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2270 |
|---|
| Symbol | |
|---|
| ID | 6782266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 2640421 |
|---|
| End bp | 2642406 |
|---|
| Gene Length | 1986 bp |
|---|
| Protein Length | 661 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642768266 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002139078 |
|---|
| Protein GI | 197118651 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCTTC CCAAGCTGCG CTTTCCCATA AAGACCAAGC TCACCGTGGC GACGCTCATC
CCGCTGGGGA TAGCGATCCT CATCTGCTGG ATGGCCGGGG TCTTCATTTT GAGCTCCAAG
GTCGCCGCCC AGGCCCAGGA GAAGGTCCGC TACGACCTGA GTGTCGCCCG CGAGGCTTAC
CAGAGCGAGC TTTCGCGCAT CTACGACGTG GTGAAGCTCA CCGCCTCCTT CGGCAGGACC
GCCGAGACCA TCGCCTCCGG CGACCGGCGG GCGGTGAGCG AGTCGCTTTC TTCATTGCGC
GCCAGCGAGC GCCTGGACAT CCTCGCCGCC GTAGACGCCT CGGGAAAGGT GATCTTCAGG
GCCAACAACC CCGAGCTGCG CGGCGACGAC AAGACCCGCA ACCAGTTCGT AGCGCGCGCT
TTGAAGGGGG AGATCGCCAG CGGCACCACC ATCCTCCCCT CTTCCGAGCT TGAGCTCGAA
GGAGACAGCC TGGTGCGCCA GGCGCGCATC TTCCCCGCCG CAGGAACCCC GGTGCAGCTA
AACGGCGCCA TGTTCCTCCT GGTCGCGGCA CCGGTGCGGG ACAAGGCGGG GAACCTGCTG
GGGGCGCTCT ACGGCGGGGT GCTCCTCAAC AACAACCAGA AGCTCGTGGA CCGGATCCGC
TCCGTGGTCT ACGAGGGGGC GCGGAAAAAC GGCCGGGACG TTGGTAACTC CACCATCTTC
CAGGGGGACA TAAGGATCGC CACCAACGTC CCCAACACCG ACGGCAGCCG GGCCGTCGGC
ACCAGGCTCT CCGCGCCGGT CCAGGAGCGG GTGCTCCTCA AGGGGGCCAA GTGGGTCGGG
CGCGCCTTCG TGGTGAACGA CTGGTACCTG ACCGCCTACG AACCGATCCT CTCGCTGCAG
GGGGTCCCGA TCGGCGCCCT CTACGTGGGG ATGCTGGAGA GCCAGTATTC GGCGGTCAAG
ATCGACATGG CCGTCCTTTT GAGCTTCGTC CTTTTGGTGA GCGGCCTGGT GGGGGTCTCC
ATGGCCGGGT TCCTGGGGAG GAAGCTCTCC CAGCCCATAC GGGAGTTGGA CCTTCTGGCG
CGACGCGTAG CCGCAGGCGA GCGCAACGTG AAAAGCAGCA TCGACTCCCG GGACGAGATC
GGCGACCTGG CGGTGCGGTT CAACGACATG AGCCGTTCGC TCGTGGAGCG CGAGGACTCG
ATCATCGAAC TGAACCGCAA CCTGGAAGAG AAGGTGCAGT CGAGAACGGC GGAACTGGAG
GAGAAGAACC GGCTCCTGGT GCAGACCCGC GAGGAGTTGT TGCGGGTGGA GAAGCTGGCG
GCGATAGGCG AGCTGGCTGC GGGGGTCGCG CACGAGATCA ACAACCCGAT GGCGATCATC
CGCGGCAACA CGGAGTTGTT GCAGCTCTCG GTGCCGGAGG AAGCCCCGAT CCGTGAGGAA
GTGGACACCA TTTTCCAGCA GGTGAAAAGG GTGGAGCGGA TCGTATCGAA CCTGTTGAAA
TTCGCCAGGC GCGAGCAGAT GGAAGCTGGA GCCGTGCGGC TGAACGAGCT CTTGCACGAG
ATCGTGGGCC AGATCGGGCA CCAGGTGTCG CTTGAGAGGA TAGAGATAGC GGAGCAGTAT
GCGGAGAGCG TGGCGCAGGT GGAGGGGGAT GCGGACCAGT TGCGTCAGGT GTTCACCAAC
CTGGTCTTGA ACGCGGTGCA GGCGATGCCG TCAGGGGGCG TTCTCTCGGT GAGGACCCAG
CAGGTGGAGC CCGCGGGGAG CTACGAGGTA AAAGTCGGCG ACACCGGGGT CGGCATCGCG
CTGGAGAACC TGAGACAGGT ATTCAACCCC TTCTACACCA CCAAGGCCAA CGGCACCGGC
CTCGGACTTT CCGTATCCTA CGGCATCGTC CGGGAGCATG GAGGGCGCAT CGACGTCGAG
AGCGTCCCGG GCGGCGGGAG CACCTTCACC GTGGTGCTCC CGCGCTCCCA AACGCCGGGG
GCCTAG
|
|---|
| Protein sequence | MTLPKLRFPI KTKLTVATLI PLGIAILICW MAGVFILSSK VAAQAQEKVR YDLSVAREAY
QSELSRIYDV VKLTASFGRT AETIASGDRR AVSESLSSLR ASERLDILAA VDASGKVIFR
ANNPELRGDD KTRNQFVARA LKGEIASGTT ILPSSELELE GDSLVRQARI FPAAGTPVQL
NGAMFLLVAA PVRDKAGNLL GALYGGVLLN NNQKLVDRIR SVVYEGARKN GRDVGNSTIF
QGDIRIATNV PNTDGSRAVG TRLSAPVQER VLLKGAKWVG RAFVVNDWYL TAYEPILSLQ
GVPIGALYVG MLESQYSAVK IDMAVLLSFV LLVSGLVGVS MAGFLGRKLS QPIRELDLLA
RRVAAGERNV KSSIDSRDEI GDLAVRFNDM SRSLVEREDS IIELNRNLEE KVQSRTAELE
EKNRLLVQTR EELLRVEKLA AIGELAAGVA HEINNPMAII RGNTELLQLS VPEEAPIREE
VDTIFQQVKR VERIVSNLLK FARREQMEAG AVRLNELLHE IVGQIGHQVS LERIEIAEQY
AESVAQVEGD ADQLRQVFTN LVLNAVQAMP SGGVLSVRTQ QVEPAGSYEV KVGDTGVGIA
LENLRQVFNP FYTTKANGTG LGLSVSYGIV REHGGRIDVE SVPGGGSTFT VVLPRSQTPG
A
|
|---|
| |