| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2225 |
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| Symbol | |
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| ID | 6782221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 2588399 |
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| End bp | 2589478 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642768221 |
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| Product | cobalamin (vitamin B12) biosynthesis CbiM protein |
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| Protein accession | YP_002139033 |
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| Protein GI | 197118606 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
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| TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000325574 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATATGG CGGACGCTTT GCTTTCCCCG GCGGTGGGAG GGATCATGTG GGCGGTCTCG
GCAGGGACCA TCGCCCTCGG TTCAGCCCAA CTGCGCCGTG AGCATGACGA CCGCCAGGCC
CCCCTGATGG GAGTGTTGGG AGCCTTTCTT TTCGCCGCGC AGATGATCAA CTTCTCCATA
CCGGGGACCG GTTCCAGCGG TCACTTGGGC GGCGGCCTGC TGCTGGCGGT CCTGCTCGGC
CCTTCGGCCT CCTTCCTGAC CATTGCCTCG GTGTTGGTGG TGCAGGCTCT ATTCTTTGCC
GACGGCGGCC TCTTAGCGCT TGGCTGCAAC ATCTTCAACC TGGGCGTCAT CCCATCCTTT
CTGGTCTACC CGTTCTTGTA CCGCGCCCTC TCGAAGGGGG AGATGTCGAA GGGGGACAGG
CACCTTGCGG AGCCAGTCCC CGGAGGCGCG CCCGGCAAAT TGCGGGAGAA CGCGGCCGTC
ATGATATCAG CGCTGGTGGC AATGCAGCTG GGCTCCTTGG CCGTCGTGCT GGAAACCGGT
CTGTCGGGTA TATCTTCGCT TCCCCTGGAG CGTTTCCTGT TGCTGATGCA ACCCATACAC
CTCGCTATCG GAGCGGTCGA GGGGGCGGTG ACAGTCGCCA TTCTTTCCTT CGTGCGCAAG
GCGCGCCCGG AACTGTTGCG GCGTGCTCCT GACAACGCCG GGCGCTCCCG CTTCGCAGTC
TTGCTCGCCT TCCTCGTCAT TGCCCTGGTC ACCGGCGGCT TCCTTTCCCA ATTGGCTTCC
AAAAACCCGG ACGGGCTGGA ATGGTCGTTC GCCAAGGCGG GGGGCAAAGT CGCCGCTCCC
GGGGCGGGTG AGGGTGTGCA TGGTCTTCTC GCTCACCTGC AGGAGAAAAG CGCCTGGTTC
CCCGATTACG CCGTAAAGCG TGCCGCGCCC CGCCCGCTGC CAAGCGGTGC CGGTGATCTG
CCGGATGCCG CGAGCGCCGT TCCGGGAGTA GTCGGCACAA TCCTCACCCT TGCCCTGGTC
TGCGTTGCCG GGGCGTTGTT GAAGAGAGGA AAGGAAAGGG TGGAGACCCC CGATGCCTGA
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| Protein sequence | MHMADALLSP AVGGIMWAVS AGTIALGSAQ LRREHDDRQA PLMGVLGAFL FAAQMINFSI
PGTGSSGHLG GGLLLAVLLG PSASFLTIAS VLVVQALFFA DGGLLALGCN IFNLGVIPSF
LVYPFLYRAL SKGEMSKGDR HLAEPVPGGA PGKLRENAAV MISALVAMQL GSLAVVLETG
LSGISSLPLE RFLLLMQPIH LAIGAVEGAV TVAILSFVRK ARPELLRRAP DNAGRSRFAV
LLAFLVIALV TGGFLSQLAS KNPDGLEWSF AKAGGKVAAP GAGEGVHGLL AHLQEKSAWF
PDYAVKRAAP RPLPSGAGDL PDAASAVPGV VGTILTLALV CVAGALLKRG KERVETPDA
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