Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2154 |
Symbol | |
ID | 6782148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 2507408 |
End bp | 2508253 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642768148 |
Product | periplasmic binding protein-related protein |
Protein accession | YP_002138962 |
Protein GI | 197118535 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.365031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGCTCAA AGCTGCATAC CTGCTGTATC GCTTTCGCAA TCCTTCTATT GCTTGCCTTG CCTGCACTGT CAGCAGAGCC AGCGAAAAGA AGCTATACAT TGGCAGTTGT CCCCAATCAG CCTGCCATAA CACTGCACAA GAACTGGACC CCTTTCGTGC AGTACCTCTC CAAGCAACTG GGCGTGGAAA TCGAGTTGAA GCTTTACGAC AAGATCGACG TCTTTCTGTC GGAGACGCAG AAAGGCGCGG CGGATCTCAT TTATTCCGCA CCGAACATGT TCTATCTCGC CTACCAGAAG CAGAAATACG TTCCGCTGGT GCGCAGCTCC CATCCGTTGC AGGGGCAGGT CTTCGTGAGA AAGGACTCCC CCTACCTCAA GGTGAGCGAT CTCAAGGGTA AGACGATCGC TTCCGTCGGG CCCAGATCCA TCTGCAGCGT CATCACCCGC CACGCGCTGC TCACCGGCCA GGGCGCCATC GACTACAACT CGACCTTCAG TGGATCGACC ATCAACGTGG CCAAGAGCGT CCTATTGGGG AAGGTCGACG CCGGCGTCAC CCTTGACACC AGCGTCATCA ACGACGCCCC CGAAATGCTC AGCGAGTTCC GCGTCATCCT GCGGACGGAG AAGATAGCGC CGCACCCTTT GGCGGCCCAC CCCCGCGTCC CCAAAAAGCT CCAGGATGCC GTGACCAGGG CGGTGCTAGC CCTGGACCAG TCGGAGGAAG GGCGCAGGAT GCTGAAGGAC GTGAAGCTTG TGGACCCGAT AAAGGCGAAC TTCAAGCGGG ATTACAGCTT CTTTGCCAAG GTCGATCTTG AGGGACCTCG GCAACAGGCG AAGTAG
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Protein sequence | MCSKLHTCCI AFAILLLLAL PALSAEPAKR SYTLAVVPNQ PAITLHKNWT PFVQYLSKQL GVEIELKLYD KIDVFLSETQ KGAADLIYSA PNMFYLAYQK QKYVPLVRSS HPLQGQVFVR KDSPYLKVSD LKGKTIASVG PRSICSVITR HALLTGQGAI DYNSTFSGST INVAKSVLLG KVDAGVTLDT SVINDAPEML SEFRVILRTE KIAPHPLAAH PRVPKKLQDA VTRAVLALDQ SEEGRRMLKD VKLVDPIKAN FKRDYSFFAK VDLEGPRQQA K
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