| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2129 |
|---|
| Symbol | |
|---|
| ID | 6782123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 2476712 |
|---|
| End bp | 2477560 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642768124 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_002138938 |
|---|
| Protein GI | 197118511 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.136588 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGAAGC AGGAAGGAGA AATTCAGGAA TTGGCGTGCG TGCAGGGACA ACAATCGGCC
CTGGCGAGCG ATCAGGAAAG CCGCCTCGCC CTCTGCCAGG CAAAGCTTGC CGAAACCGAA
GCCCTTTTGA AACAAGAACA GCAGGGGCGC TGCAAGGCGG AGCGGGAGGT CGCCCTTCTT
GCCCAGGAGC TGGAAAGCTT CAGCTATTCC GTCTCCCACG ACCTGCGCGC GCCGCTTAGG
CACCTCGTCG GTTTCAGCAG CGCCCTCGTC GAGGACTACA ACGAACAACT GGAGCCGACC
GCGCAGAGCT ACCTGGACTG CATCACCAGG TCTGCGCGCA AGATGGAGGA CCTTCTCGAA
GCGCTTCTCT TTCTCTCCCG GGTGACCAAA CAGGATCTGA CTCTCGTCGA AGTGGACCTG
GCCGCGCTGG CGCGCCAATA CGCGGGGTCT TTGCAGCAGG CCGCCCCCGC GAGGCAGGTA
GAGTTCAGGA TAGCGGAGGA ACTGCCGGTC AAGGCAGACC CCCAGCTGAT GAGGACGGTT
ATCGAGCAGT TGCTGGGGAA CGCCTGGAAA TTCACGGCCA AAAAGGAAAG GGCGACAGTC
GAGTTCGGAG AAAAGAAGGA AGGGGACAGT ACCGTCTACT ACATCCGCGA CGACGGGGCG
GGGTTCGACC TGCGCTTCGC CCAGCGGCTC TTCGCTCCGT TTCAGCGCAT GCACCGCGAG
GAAGAGTTCC CCGGCCTCGG GATAGGGCTC GCCACGGCGC AGCGCATCGT GCACCGCCAT
GGCGGGAGGA TCTGGGCCGA GGCCGAGGTC GGCAACGGCG CGACTATCTG CTTCACCCTC
TGCCCCTGA
|
|---|
| Protein sequence | MKKQEGEIQE LACVQGQQSA LASDQESRLA LCQAKLAETE ALLKQEQQGR CKAEREVALL
AQELESFSYS VSHDLRAPLR HLVGFSSALV EDYNEQLEPT AQSYLDCITR SARKMEDLLE
ALLFLSRVTK QDLTLVEVDL AALARQYAGS LQQAAPARQV EFRIAEELPV KADPQLMRTV
IEQLLGNAWK FTAKKERATV EFGEKKEGDS TVYYIRDDGA GFDLRFAQRL FAPFQRMHRE
EEFPGLGIGL ATAQRIVHRH GGRIWAEAEV GNGATICFTL CP
|
|---|
| |