| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2125 |
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| Symbol | |
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| ID | 6782119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 2469015 |
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| End bp | 2470826 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642768120 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_002138934 |
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| Protein GI | 197118507 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00466238 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGG TTCCTTACCG GTCGATACCG GACATGCTCA GACATAGCGC CGCTCAATAC
CAGACGCTTA ACGCCGTCGA GTTCAGAAAG AACGGACAGT GGGTCACCCT GAGCTACGCC
CAGTTCTACA ATCGGGCGCT CATGGTGTCG CGGGGGCTGC GCAAGCTGCG GATGAAACCC
GGGGACAGGA TCGCCATCTT GTCCGAGAAC CGCGCCGGGT GGATCATCGC CGACATGGGC
ATCCTTTGCG GCGGCGGCGT CACCGTCCCG GTCTATGCCA CCGGCACTCC GGACCAGATA
GCCTATGCGC TTTCCAGTTG CGAGGCGCGC ATCGTCTTCG TCTCCGGCAA GGTGCAATAC
CGGAAGCTGC TCCAGGTGCG GGACGCGCTG CCCCATCTGG AACACGTCAT CTCCTTCGAG
CGCTTCCTAG GCGAAGCGGC GCTGCCGGTT ACGACCTTCT ACCAGCTGAG CGAGGTGGAC
GACCCCATCC TCGACACCGA AAGGGCCGAG ATCGATTCGG TGATCGACTC TCTTACCCCG
GAAATGCCGG CCACCATCAT CTACACCTCG GGTACGACCG GCACCCCCAA GGGGGCCGTG
CTCACGCACG GCAACCTCGT TTTCGACGTC TGGGCCACTC TCGACAAGGT CGGGGGGGTG
GGGCAGGAGG ACCTCTTCCT GAGTTTTCTC CCCCTAAGCC ACGTATTCGA GCGCAGCGTC
GGGTACTATC TCCCCCTTTC CTGCGGCGCC GCCATCGCCT TCGCCGACAG CATGGAGAAG
ATCTCGGAGA ACATGATGGA GCTGCACCCG ACCATCATGG TCTGCGTGCC GAGGTTCTTC
GAGAAGATCT ATTCCCGCAT CTACGAAGCG GTGCATCAGC TCTCCCTTTT CAAGAGGAAG
ATGTTTCGGC GCGCCCTTGC CGTCGGGCGC AGCTACGTCT ACGCGCGCTA CATAGACAAG
TACGTGCCGT TTTGGCTTTC CTTCCAGCAC GCGATCGCGG ACCGGCTGGT ATTCAGCAAG
CTGCGCAGCC GCTTCGGCGA CCGCCTCAAG TTCTGCGCCA GCGGCGGAGC CCCCCTGGAC
CGGGAAATCA ACGAGTTCTT CTGGATCATC GGCGTCCCGG TCTTCGAGGG GTACGGCCTC
ACCGAGACGA GCCCGGTCCT TTGCAGCAAC AGCTATAACG GCCTGCGCTT CGGGTCGGTG
GGGACCCCTC TTGCCTTCAC CGAGATCGCC ATAGCAGGCG ACGGCGAGGT GCTGGCGCGC
GGCCCGCAGG TCATGGCCGG CTACTATAAC GACGAGGCCG CGACGAAGGA GGCGCTGGTC
GACGGCTGGT TCAGGACCGG CGACATCGGC CGCTTGGAGG AAGGCTTCCT CTATATCACC
GACCGCAAAA AGGATCTGAT CGTCACCGCC GGAGGGAAGA ACATCGCCCC CCAGCCGATC
GAGAACCTCC TGAAGCGGGA CAAGTACATC TCCCAGGCCT ACGTATACGG CGACAGGAAG
CCATACCTGA CGGCACTTCT GGTCCCGACC CTGGAAAGGC TTTTGGAATT CGCCCAGGAA
CGCAGAATCG CCTACCACGA CCTGGAAGAC CTGGTCGTGC ACCAGCCGGT GATCGAGCTG
TACAAAAGCC GCGTCGAGGC TGTCAACAAC GAGCTTGCCC CCTTCCAGAC CATCAAGAAG
TTCGCGCTCT TGCCGCGCGA CTTCACCATG GACAGCGGCG AGCTGACCCC GACCCTCAAG
GTGAAACGGC AGGTAATCTC GGAGAGGTAC CGGGACCAGA TAGACCATCT CTACAACGGC
AGCGAATCGT AA
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| Protein sequence | MEKVPYRSIP DMLRHSAAQY QTLNAVEFRK NGQWVTLSYA QFYNRALMVS RGLRKLRMKP
GDRIAILSEN RAGWIIADMG ILCGGGVTVP VYATGTPDQI AYALSSCEAR IVFVSGKVQY
RKLLQVRDAL PHLEHVISFE RFLGEAALPV TTFYQLSEVD DPILDTERAE IDSVIDSLTP
EMPATIIYTS GTTGTPKGAV LTHGNLVFDV WATLDKVGGV GQEDLFLSFL PLSHVFERSV
GYYLPLSCGA AIAFADSMEK ISENMMELHP TIMVCVPRFF EKIYSRIYEA VHQLSLFKRK
MFRRALAVGR SYVYARYIDK YVPFWLSFQH AIADRLVFSK LRSRFGDRLK FCASGGAPLD
REINEFFWII GVPVFEGYGL TETSPVLCSN SYNGLRFGSV GTPLAFTEIA IAGDGEVLAR
GPQVMAGYYN DEAATKEALV DGWFRTGDIG RLEEGFLYIT DRKKDLIVTA GGKNIAPQPI
ENLLKRDKYI SQAYVYGDRK PYLTALLVPT LERLLEFAQE RRIAYHDLED LVVHQPVIEL
YKSRVEAVNN ELAPFQTIKK FALLPRDFTM DSGELTPTLK VKRQVISERY RDQIDHLYNG
SES
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