Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2093 |
Symbol | |
ID | 6782087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 2420361 |
End bp | 2421035 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642768088 |
Product | outer membrane chaperone Skp (OmpH) |
Protein accession | YP_002138902 |
Protein GI | 197118475 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000603573 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGGT TCGCCGCATT GCTAATCGGT TCCGCCCTCA CCTCCCTCAT CGCCAGTCAC GGTTTTGCCG CGGATGCTCA ACCGTCAGCC GCAGCACCAG CGAAACAGGC GCCAGCAGAA ACAGCGGCGA CTACAGCTCC CGCAACTCCG GCGGCGCCCG CAGCGCAACC CCCTGCGGCT AAAGACGAGA AAATAGCCCA GGCTCCCACT GCTGGAAAAG AGGTGAAGGT CGGCTTCATA ACCCTGAACA AAGTTGCCTC CGAAACCGCA GAGGGGAAGG CCGCCACTGG CAAGCTGAGC GTACGGTCTG CCAAGCTGCG CGAAAAAATC GACGCAAAGC AGAAGCAGCT TGAGAAGCAA AAGGCCGCAA TAGAGTCGAA GCTTCCCACC ATGACCCCGA AAGAGCGCCA GACCAAGGGG ACGGAATTCC AGAAAAAGGT CGAGGACTTC CAGAAGATGG TGCGCGCGAG CGAGTCGGAA ATGGCGGAAA TGCAGGAAAA ACTGACCAGC CAGGTCTATG CGCAGATTAA AGAAGCCGCG ACCGCTTACG GCAAGGCCAA CGGTTTCGCC ATTGTGGTTG AAGAAAAGGC GGTGCTCTAC CTGGCGGAAG AGCTGAAACC CAAGGACCTG ACGGCCGAGA TCATCCAGTA CATGGACAAG AAACCGGCGA AGTAA
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Protein sequence | MNRFAALLIG SALTSLIASH GFAADAQPSA AAPAKQAPAE TAATTAPATP AAPAAQPPAA KDEKIAQAPT AGKEVKVGFI TLNKVASETA EGKAATGKLS VRSAKLREKI DAKQKQLEKQ KAAIESKLPT MTPKERQTKG TEFQKKVEDF QKMVRASESE MAEMQEKLTS QVYAQIKEAA TAYGKANGFA IVVEEKAVLY LAEELKPKDL TAEIIQYMDK KPAK
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