Gene Gbem_2063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_2063 
Symbol 
ID6782057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2376834 
End bp2378792 
Gene Length1959 bp 
Protein Length652 aa 
Translation table11 
GC content66% 
IMG OID642768058 
ProductNHL repeat containing protein 
Protein accessionYP_002138872 
Protein GI197118445 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTGA AACATTTGCT AAAGGTAGCT TTCGCGGCTG TTATGACGAT GGCATTGGCC 
TCGTGCGGTG GCGGCGGAGG CGGCGGGGGG GGCGAGCCGC AGCTGACCAG CATGGGGGGA
GCGTTGCAGG GGAGATCCCT GGCCCTGACC AATAGCGTGA CCTCTTTCGC CGGTAGCGCC
GGTTCCACCG ACGGCGCTGC GTCGCAGGCG CGATTCAGCA TTCCCGGCGA CGTCGCCAGC
GACGGAACCA GTCTCTACGT CGTCGACACC GGCAACAGCG TCATCCGCAA GGTCGTCCTT
GCCACCGGGG CCACGTCGAC GGTCGCAGGG CTTGCGGGGA TCACCGGCTC GGGCGACGGC
ACCGGTGCTG TCGCGAGGTT CAACTACCCC TCCGGCATTG CCTTGAGCAG CGACAACTCC
ACGCTGTACG TCAGCGACAC CGGCAACAAC ACCATCCGCA GCATAAACGT CGCTACCGGC
GCCGTGACCA CCCTGGCCGG TACTGCGGGG GTCGTAGGTT CCACTAACGG CACCGGGGGG
GCGGCCAGGT TCAGCTCCCC CTCAGGCGTC GCCACCGACG GGGCCAACCT TTACGTCGCC
GACAGCCTCA ACCATCGCGT CCGCAAGATC GTCCTCGCCT CGGCTGCGGT CACAACCCTT
GCCGGCAGCG GTCTGCAGGA TTTCGCCGAC GGCACCGGCA TAGCTGCCAG CTTCAATTCG
CCGCGCGGCA TCGCCACCGA CGGTGTCTCG CTCTATCTCG CGGATCAGGG CAATTCCGCG
GTCAGGAGGA TCATCATCGC GACCGGTGTG GTCTCTACCT TGGTGCAGCC TGCCTCCGGC
ATAGAGTCGC CGGCCGGCAT CGCGACCGAC GGGACCAGCG TTTTCGTCAC CGACCTCGAG
AGGAACAACC TGCGCAAGGT GGACATCGCC ACCCAGGCAG TATCTACCCT GGCAGGCGAC
GGTGGTGGGA GCCCGGGAAG CACCGACGCG GTGGGGGGCG CGGCCCGCTT CAGCGCCCCT
GCCGGCTTGG TTTTGAACGC AGGCGTACTC TACGTAGCCG ACACAGGAAA CGATCTGCTG
CGCAAGGTAG CCGTTGCCAC CGGGGCCAGC TCCACCCTCG CCGGGACAGT GGGGTCCGCC
GACGGCGTAG GGGTCGCGGC TGCCTTCACC TCTCCCTACG ACCTGACCAC CGACGGCAGA
AACGTCTATG TAGCCGATAC CAACAACCAC ACGGTGAGGC AGATCTCCAT CGCCACGGGT
GCAGTGACCA CGCTGGCCGG AACCCCCGAC CGCGCAGGCT CCGGCGACGG CACCGGCGCC
GCCGCCTCCT TCAGATTCCC AAGCGGCCTC ACCACCGACG GCACCAACCT CTTCGTCTCC
GACACCGGCA ACAACACGGT CAGGAAGATC GTCATCGCCA CCGGAGCCGT TTCCACGCTG
GCCGGTACGG CCGGGGCCAC CGGTTCGGCC GACGGTGCCG GGAGCGCGGC GAGGTTCCAT
TCCCCCAACG GCCTCACCAC CGACGGGACC AACCTCTACG TTGCCGACAG CGGGAACAAC
GCCATCAGGA AGATCGTTAT CGCCACCGGC GCGGTCTCGA CCGCGGTGGC ATCCTCCGCG
GGCTTAAGTT CGCCCTACGG CGTCACCACC GACGGCACCA CCCTATTCAT CACCGACAGC
GGCAACCACA GGATCTGCAA GTTCACATTG GCAGGCTCCG CCTTCTCCTC CTTGACGGTT
ACCGGCGCTG CCTTCAACCT TCCCAGCGGC ATCACCACCG ACGGCATCAG CCTCTTCGTC
ACCGACGCGG CCAACGGTTC GGTCAGCAGG ATCGCCATTG CCACCGGCGT CGCCGGAGCC
GTCGTCACCG GGCTCAGGAA CCCCAACGGC ATCACCACCG ACGGCGTCAC GCTCTACGTC
GCCGATGCGC ACGACAACAC CGTGATCAGG GTGCACTGA
 
Protein sequence
MSLKHLLKVA FAAVMTMALA SCGGGGGGGG GEPQLTSMGG ALQGRSLALT NSVTSFAGSA 
GSTDGAASQA RFSIPGDVAS DGTSLYVVDT GNSVIRKVVL ATGATSTVAG LAGITGSGDG
TGAVARFNYP SGIALSSDNS TLYVSDTGNN TIRSINVATG AVTTLAGTAG VVGSTNGTGG
AARFSSPSGV ATDGANLYVA DSLNHRVRKI VLASAAVTTL AGSGLQDFAD GTGIAASFNS
PRGIATDGVS LYLADQGNSA VRRIIIATGV VSTLVQPASG IESPAGIATD GTSVFVTDLE
RNNLRKVDIA TQAVSTLAGD GGGSPGSTDA VGGAARFSAP AGLVLNAGVL YVADTGNDLL
RKVAVATGAS STLAGTVGSA DGVGVAAAFT SPYDLTTDGR NVYVADTNNH TVRQISIATG
AVTTLAGTPD RAGSGDGTGA AASFRFPSGL TTDGTNLFVS DTGNNTVRKI VIATGAVSTL
AGTAGATGSA DGAGSAARFH SPNGLTTDGT NLYVADSGNN AIRKIVIATG AVSTAVASSA
GLSSPYGVTT DGTTLFITDS GNHRICKFTL AGSAFSSLTV TGAAFNLPSG ITTDGISLFV
TDAANGSVSR IAIATGVAGA VVTGLRNPNG ITTDGVTLYV ADAHDNTVIR VH