Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2063 |
Symbol | |
ID | 6782057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 2376834 |
End bp | 2378792 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642768058 |
Product | NHL repeat containing protein |
Protein accession | YP_002138872 |
Protein GI | 197118445 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTGA AACATTTGCT AAAGGTAGCT TTCGCGGCTG TTATGACGAT GGCATTGGCC TCGTGCGGTG GCGGCGGAGG CGGCGGGGGG GGCGAGCCGC AGCTGACCAG CATGGGGGGA GCGTTGCAGG GGAGATCCCT GGCCCTGACC AATAGCGTGA CCTCTTTCGC CGGTAGCGCC GGTTCCACCG ACGGCGCTGC GTCGCAGGCG CGATTCAGCA TTCCCGGCGA CGTCGCCAGC GACGGAACCA GTCTCTACGT CGTCGACACC GGCAACAGCG TCATCCGCAA GGTCGTCCTT GCCACCGGGG CCACGTCGAC GGTCGCAGGG CTTGCGGGGA TCACCGGCTC GGGCGACGGC ACCGGTGCTG TCGCGAGGTT CAACTACCCC TCCGGCATTG CCTTGAGCAG CGACAACTCC ACGCTGTACG TCAGCGACAC CGGCAACAAC ACCATCCGCA GCATAAACGT CGCTACCGGC GCCGTGACCA CCCTGGCCGG TACTGCGGGG GTCGTAGGTT CCACTAACGG CACCGGGGGG GCGGCCAGGT TCAGCTCCCC CTCAGGCGTC GCCACCGACG GGGCCAACCT TTACGTCGCC GACAGCCTCA ACCATCGCGT CCGCAAGATC GTCCTCGCCT CGGCTGCGGT CACAACCCTT GCCGGCAGCG GTCTGCAGGA TTTCGCCGAC GGCACCGGCA TAGCTGCCAG CTTCAATTCG CCGCGCGGCA TCGCCACCGA CGGTGTCTCG CTCTATCTCG CGGATCAGGG CAATTCCGCG GTCAGGAGGA TCATCATCGC GACCGGTGTG GTCTCTACCT TGGTGCAGCC TGCCTCCGGC ATAGAGTCGC CGGCCGGCAT CGCGACCGAC GGGACCAGCG TTTTCGTCAC CGACCTCGAG AGGAACAACC TGCGCAAGGT GGACATCGCC ACCCAGGCAG TATCTACCCT GGCAGGCGAC GGTGGTGGGA GCCCGGGAAG CACCGACGCG GTGGGGGGCG CGGCCCGCTT CAGCGCCCCT GCCGGCTTGG TTTTGAACGC AGGCGTACTC TACGTAGCCG ACACAGGAAA CGATCTGCTG CGCAAGGTAG CCGTTGCCAC CGGGGCCAGC TCCACCCTCG CCGGGACAGT GGGGTCCGCC GACGGCGTAG GGGTCGCGGC TGCCTTCACC TCTCCCTACG ACCTGACCAC CGACGGCAGA AACGTCTATG TAGCCGATAC CAACAACCAC ACGGTGAGGC AGATCTCCAT CGCCACGGGT GCAGTGACCA CGCTGGCCGG AACCCCCGAC CGCGCAGGCT CCGGCGACGG CACCGGCGCC GCCGCCTCCT TCAGATTCCC AAGCGGCCTC ACCACCGACG GCACCAACCT CTTCGTCTCC GACACCGGCA ACAACACGGT CAGGAAGATC GTCATCGCCA CCGGAGCCGT TTCCACGCTG GCCGGTACGG CCGGGGCCAC CGGTTCGGCC GACGGTGCCG GGAGCGCGGC GAGGTTCCAT TCCCCCAACG GCCTCACCAC CGACGGGACC AACCTCTACG TTGCCGACAG CGGGAACAAC GCCATCAGGA AGATCGTTAT CGCCACCGGC GCGGTCTCGA CCGCGGTGGC ATCCTCCGCG GGCTTAAGTT CGCCCTACGG CGTCACCACC GACGGCACCA CCCTATTCAT CACCGACAGC GGCAACCACA GGATCTGCAA GTTCACATTG GCAGGCTCCG CCTTCTCCTC CTTGACGGTT ACCGGCGCTG CCTTCAACCT TCCCAGCGGC ATCACCACCG ACGGCATCAG CCTCTTCGTC ACCGACGCGG CCAACGGTTC GGTCAGCAGG ATCGCCATTG CCACCGGCGT CGCCGGAGCC GTCGTCACCG GGCTCAGGAA CCCCAACGGC ATCACCACCG ACGGCGTCAC GCTCTACGTC GCCGATGCGC ACGACAACAC CGTGATCAGG GTGCACTGA
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Protein sequence | MSLKHLLKVA FAAVMTMALA SCGGGGGGGG GEPQLTSMGG ALQGRSLALT NSVTSFAGSA GSTDGAASQA RFSIPGDVAS DGTSLYVVDT GNSVIRKVVL ATGATSTVAG LAGITGSGDG TGAVARFNYP SGIALSSDNS TLYVSDTGNN TIRSINVATG AVTTLAGTAG VVGSTNGTGG AARFSSPSGV ATDGANLYVA DSLNHRVRKI VLASAAVTTL AGSGLQDFAD GTGIAASFNS PRGIATDGVS LYLADQGNSA VRRIIIATGV VSTLVQPASG IESPAGIATD GTSVFVTDLE RNNLRKVDIA TQAVSTLAGD GGGSPGSTDA VGGAARFSAP AGLVLNAGVL YVADTGNDLL RKVAVATGAS STLAGTVGSA DGVGVAAAFT SPYDLTTDGR NVYVADTNNH TVRQISIATG AVTTLAGTPD RAGSGDGTGA AASFRFPSGL TTDGTNLFVS DTGNNTVRKI VIATGAVSTL AGTAGATGSA DGAGSAARFH SPNGLTTDGT NLYVADSGNN AIRKIVIATG AVSTAVASSA GLSSPYGVTT DGTTLFITDS GNHRICKFTL AGSAFSSLTV TGAAFNLPSG ITTDGISLFV TDAANGSVSR IAIATGVAGA VVTGLRNPNG ITTDGVTLYV ADAHDNTVIR VH
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