| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2046 |
|---|
| Symbol | |
|---|
| ID | 6782040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 2353998 |
|---|
| End bp | 2355941 |
|---|
| Gene Length | 1944 bp |
|---|
| Protein Length | 647 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642768041 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_002138855 |
|---|
| Protein GI | 197118428 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.391167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGATG CGCCGCTGTA CAACAGCAGG ATCACGGATA CGTACATAAA GCTGATCAAG
AACAAGTACA GCTTTGTCAA CATCACGGAA CTGCTCGACT ACGCAGGCAT GAGCCCGTAC
GAGGTGGCCG ACCAGGGGCA CTGGTTCACC CAGGAGCAGG TGAACCGCTT CCACGAACGG
CTCCTGAAGC TTACCGGCAA CGAGAACCTC GCCCGCGAGG CCGGGCGCTA CGCCGCCTCC
CCCGATGCGA TCGGAATGAT GAGGCAGTAT TTCCTGGGAC TGGTCGGCCC CGCTAAGGCC
TACGAGATGA TCGGCAAGGC GACCAACAAC AACTTCGTCC GCTCCTCCGT CTACACCTCC
AGGAAACTAG CCGCCAACAA GGTGGAGATC ACCGTCACCC CGCGCCCCGG CACTAAGGAG
CAGCCCTTCC AGTGCCAGAA CCGGATCGGC TTCTTCGAGG CCGTGGCCGC AGCCTTCGAC
GTGAAGCTTC CCCGCATCGA ACACCCCGAG TGCATATTCC AGGGGGGGCA GGAATGCCGC
TATATCGTCT CCTGGGAGAA ATCGAGCCAT ACTTTCTGGG AATCCACGCG GAATTACGCA
GTACTCGCCC TCTCCCTGCT GTCGGCCATC TCCATCGCCA TCAGTCCGCA TCAGGGGTTG
GAGAGGGTGC TGCCGGCGTC TGCCATAACG GTGCTGCTTT TGAGCGTCAT CGCGCTCAAC
GGCGAGAAAA AGGCGCTCCT CGCCGGCCAG TTGAACCTGA AGGACCTCTC CGACAACCTG
TTCAAGCAGC TCGAGCTCAA CTACAACAAC GCCCTCGTCA CCAACGAGAT CGGCCAGGTG
ATCAGCAAGC AGACCCGCCT CCACGACATC CTCGCCAACG TCGTCCTCGT GCTGGAGAAG
CGCCTCGACT ACAGCCGCGG CCTGATCCTT CTGACCAACC AGGAGAAGAC CAAACTGGTC
TTTCACGCCG GCTTCGGCTA TTTCGACGAA CAGTTGAGCT TCCTCAGCAA GACCACCTTC
CAGCTGGACC GCCCGGAGGC TAAGGGCGTG TTCGTGGTCT CCTACCGCGA GCAGCGCCCG
TTTCTCGTGG GGGACATCAA CGAGATCGGC GGCAACCTGT CGGGGAAGAG CCAGAACTTC
GCCAAGCAGC TCCTGTCGCA GACCTTCATC TGCTGCCCCA TCATCTGCGA GGGCGAATCG
CTCGGCATCA TCGCCGTCGA CAACCTGAAG TCGAAGCGCC CCCTGGTGCA AAGCGACATG
ACGCTCCTGA TGAGCATCGC CCCGGTCATC GGCATCGCGA TTCACAACGC GAACCTGCAC
GAGGCGAAGT CGACCCAGTT CAGCTCCTTT TTGAAGGTCA TGGCAGCCTC CATCGACGCC
AGGGATCCTC TCACCGCCGG GCACTCCGAG AAAGTCACCG AGTACTGCGA GGAGATCTGC
CATGAACTGG GACTCCCCGA GGACGAGGTG GAGATGATCA GGGTCGCGGC CCTTTTGCAC
GACTACGGCA AGATCGGCGT TCCCGACGCC ATCCTCAAGA AAAACGGCAG GCTCTCCGAC
CTGGAGTACG AGATCGTCAA GACGCATTGC CACAAGACCA GGGACATTTT GGAGCAGGTC
AACTTCGAGG GGATTTACCG GCAGGTTCCC GAGATAGCCG GCGCGCACCA CGAAAAGATC
GATGGCACCG GCTATCCGAA AGGGTTGAAG GGAAAAGACA TACCGTTGGG AGCGAAGATC
ATCGCCGTCG CCGATTTTTA CGAGGCCGTG ACCTCGCAGC GTCACTACCG GGACCCCATG
CCGATGGAAG AAGCCTTCCG GCTGTTAAGG GAAGGGAGCG GGTCGCACTT CGAAAGGCAT
ATCGTGGAAG CCTTCATCAA CTGCCGCAAG CGCGGGGCAG ACGAGGAAGG CGAGGTCCGC
GCGATTCAAC CCTTTCCGGC ATGA
|
|---|
| Protein sequence | MMDAPLYNSR ITDTYIKLIK NKYSFVNITE LLDYAGMSPY EVADQGHWFT QEQVNRFHER
LLKLTGNENL AREAGRYAAS PDAIGMMRQY FLGLVGPAKA YEMIGKATNN NFVRSSVYTS
RKLAANKVEI TVTPRPGTKE QPFQCQNRIG FFEAVAAAFD VKLPRIEHPE CIFQGGQECR
YIVSWEKSSH TFWESTRNYA VLALSLLSAI SIAISPHQGL ERVLPASAIT VLLLSVIALN
GEKKALLAGQ LNLKDLSDNL FKQLELNYNN ALVTNEIGQV ISKQTRLHDI LANVVLVLEK
RLDYSRGLIL LTNQEKTKLV FHAGFGYFDE QLSFLSKTTF QLDRPEAKGV FVVSYREQRP
FLVGDINEIG GNLSGKSQNF AKQLLSQTFI CCPIICEGES LGIIAVDNLK SKRPLVQSDM
TLLMSIAPVI GIAIHNANLH EAKSTQFSSF LKVMAASIDA RDPLTAGHSE KVTEYCEEIC
HELGLPEDEV EMIRVAALLH DYGKIGVPDA ILKKNGRLSD LEYEIVKTHC HKTRDILEQV
NFEGIYRQVP EIAGAHHEKI DGTGYPKGLK GKDIPLGAKI IAVADFYEAV TSQRHYRDPM
PMEEAFRLLR EGSGSHFERH IVEAFINCRK RGADEEGEVR AIQPFPA
|
|---|
| |