| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1952 |
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| Symbol | |
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| ID | 6781942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 2254701 |
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| End bp | 2256779 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642767944 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002138762 |
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| Protein GI | 197118335 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTCTT CACCCCAGTT CAAACGAATT CTTATCGTGG AAGATGACGA GTCTCACGCG
GAACTGATTA GGAGAGGTTT CAGCGAGGCC TCGGACCACT ATCGTCTGAC CGTCGCCACC
AGTATGCAGG AAGCGCTCGC CAGGGTGCAG AGCAATAATT TCGACATAGT GCTCACCGAT
TACCTCCTTC CCGATGGCAA AGGCGTGGAC CTGGTGCTGA AAAGCGGGCA GACCACGCCG
GTAGTGATCA TGACCTCGCA CGGCAACGAA CAACTCGCAG TCGACGCCAT GAAGGCCGGC
GCGCTCGATT ACGTGGTCAA AATGCCTGAG GTATTCGAGG CAATGCCGCG CATCATAGAA
CGCGCCTTGC GCGAATGGGA CTTGATGCTC GAACACAAGC ACGCCGTGGA CGCGCTCCTG
TTGCAGACCC GTCAACTTGA ACATGAGGTG GCCGAGCGGC AGATCGCCCA GGAGGCGCTG
CAGGCGCAAG CGGTGCTTTT GCAAAACGAG ATCGCGGAGC GCCGGCAGGC CCAGGAGACT
CAGCGGCTTT CGGAGGAAAA ATTCTCGAAG GCCTTCGACA ACGCTCCCAT GATCATGACC
ATCACGATGC GGGAAAACGG CACCCTCCTC GACGTCAACA ACAGGTTCCT GGAAGTTTCC
GGCTGGTGCC GGGAAGATGT CATCGGCAAG ACCACCAGAG AGGTCGGCTG GATCAACAAC
GACGACCGGG CAATTCTGTT CGAGACCCTC AATCGGGAAG GGCATGTCTC GGGGTTGGCA
TTGAGCCTCC ACCCAAGGGG CGGGCGGACC ATCAAGGCCG AACTCTACAT AGAGACCATC
ACCGTGGACG GCAGCGAACG CCTTTTGGGG ATCGCCATCG ACGTCACGGA ACGGCACAAG
CTCGAGGAAC AGTTGCGCCA CTCCCAGAAG CTGGAAGCGG TCGGCCTTTT GGCCGGCGGA
GTGGCTCACG ACTTCAACAA TATCCTCACC GTGATCGGCG GGTACTGCGA GATGCTCAAA
CTCGATCTCG CGCCCGGCCA TCCCCTGCGC GACAAGGTGC TGCAGATATC CGCCGCCTCC
GAGCGCGCCT CCAACCTGAC CCGCAGCCTG CTTGCTTTCA GCCGCAAGGG GGAGGTGAAG
GCGGTTCCGA CCGACCTGAA CCTGCTGTTG CGAGGGGTGG AGAAGTTCCT GCAGCGCATT
ATCGGCGAGG ACATCACCCT TTCCACCAAG GTCCCCGAGA GAGCCATCTG GGCGGTGGTC
GATTCGGGGC AGATCGACCA GGTGCTGATG AATCTCGCGG CCAACGCGAG GGACGCCATG
CCCAAGGGGG GGAGCCTGTT CGTGGAGTTG GAGCGCCAGG AGATCGACGC CGGTTTCGTG
CAAGCCCACG GCTTCGGGAC TCCCGGCAGC TATGCCCTGC TTACCGTTTC CGATACCGGC
CAGGGGATGG ACGAGGAGAC TAGGAACAGG ATCTTCGATC CGTTTTTCAC CACCAAGGTG
TCGGGAAAGG GGACAGGGCT CGGCCTCGCT ATCGTCTACG GCATCGTTAT CCAGCACAAG
GGGTTCGTCA ACGTCTACAG CGAGCCCGGT GTGGGCAGCA CCTTCCGCAT CTATCTCCCG
GTGGTGGAGC CGCAGCAGCT CGCCGGCACC GAGGCCGTCA CCGTCGAGGC TGAGGTGCGC
GGCTGCGAGA CCATCTTGGT TGCCGAGGAC GATCTGTACG TCCTGGACCT GGTGACGAAC
GTCCTCGTGC AGTACGGCTA CAGCATCATC CATGCTGCCA ACGGGGAGGA AGCCGTGCAG
AAGTTCCAGG AGAACGACCA GATAGCGCTG GTGCTGATGG ACATCATCAT GCCGGTCATG
AACGGCAAGG AGGCCGCCGA AAAGATCCGG CGGCTGCGGC CCGAGGCCAG GATTCTTTTC
ACCAGCGGCT ACACGGCGGA GATAATCAAG AGCAGATGCG AGTTGGAGGA GAGTGCGGAA
TTGATCATGA AGCCGGTCAA GCCTGCCCTC TTGCTCAAGA AGGTGCGGGA GATGCTGGAC
CGGCCCCCGC GGATATCAGG CAGGGGAGGG AAAGCATGA
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| Protein sequence | MDSSPQFKRI LIVEDDESHA ELIRRGFSEA SDHYRLTVAT SMQEALARVQ SNNFDIVLTD
YLLPDGKGVD LVLKSGQTTP VVIMTSHGNE QLAVDAMKAG ALDYVVKMPE VFEAMPRIIE
RALREWDLML EHKHAVDALL LQTRQLEHEV AERQIAQEAL QAQAVLLQNE IAERRQAQET
QRLSEEKFSK AFDNAPMIMT ITMRENGTLL DVNNRFLEVS GWCREDVIGK TTREVGWINN
DDRAILFETL NREGHVSGLA LSLHPRGGRT IKAELYIETI TVDGSERLLG IAIDVTERHK
LEEQLRHSQK LEAVGLLAGG VAHDFNNILT VIGGYCEMLK LDLAPGHPLR DKVLQISAAS
ERASNLTRSL LAFSRKGEVK AVPTDLNLLL RGVEKFLQRI IGEDITLSTK VPERAIWAVV
DSGQIDQVLM NLAANARDAM PKGGSLFVEL ERQEIDAGFV QAHGFGTPGS YALLTVSDTG
QGMDEETRNR IFDPFFTTKV SGKGTGLGLA IVYGIVIQHK GFVNVYSEPG VGSTFRIYLP
VVEPQQLAGT EAVTVEAEVR GCETILVAED DLYVLDLVTN VLVQYGYSII HAANGEEAVQ
KFQENDQIAL VLMDIIMPVM NGKEAAEKIR RLRPEARILF TSGYTAEIIK SRCELEESAE
LIMKPVKPAL LLKKVREMLD RPPRISGRGG KA
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