Gene Gbem_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1945 
Symbol 
ID6781935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2249010 
End bp2249783 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content62% 
IMG OID642767937 
ProductABC transporter related protein 
Protein accessionYP_002138755 
Protein GI197118328 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATAC TTAAACTCGA AGACGTCACC ATCCGCTTCG GCGGCCTGGT CGCGGTGGAC 
AAGGTAAACC TCACGGTAGA GAAGGGGAAC ATCATGGCCC TCATCGGCCC CAACGGCGCC
GGCAAGAGCA CCATGTTCAA CCTCATCACC GGGATCTACT CCCCGACCGA GGGGCGGATC
TCCTTCATGG ACGAGAGCAT CTCCGGGAAG ACCCCGTTCC ACATCGCCGC CGCGGGGATC
GGCCGCACCT TCCAAAACAT CAGGCTCTTC ACCCAGTTGA CCGTCCTGGA GAACGTCCTG
ATCGGCGCCC ACACCAGGGG GAAATGGGAC CTGACCGGGG CCGTGCTGAA GTTCCTCCCC
TTTGTGCGGC GCGAGGAATC CGAGCTCAAG GAGCTGGCCA TGGCCTGCCT GAAACAGGTC
GACCTCTGCC ACAAGGCGGA CGAGCTGGCG GGGAACCTCC CCTACGGCGA ACAGCGCCGC
CTGGAGATCG CCCGCGCACT CGCCATCAAG CCGCAGATCA TCCTCCTGGA CGAGCCTGCC
GCGGGGATGA ATCCGCAGGA AAAGCAGGTC CTGGCGGAGA TGGTGAAAGC GATCAGCAAG
ACCGGCGTGA CCGTGTTCCT GGTCGAGCAT GACATGAAAT TCGTCATGGG GATTTCCGAC
CGCATCGCCG TCCTCGACTA CGGGGTGAAG ATCGCCGAGG GGACTCCGGA GGAGATCCGG
ACCAATCCCA AGGTGATCGA GGCGTACCTC GGCAAAGGAG CAGCGCATGC TTAA
 
Protein sequence
MSILKLEDVT IRFGGLVAVD KVNLTVEKGN IMALIGPNGA GKSTMFNLIT GIYSPTEGRI 
SFMDESISGK TPFHIAAAGI GRTFQNIRLF TQLTVLENVL IGAHTRGKWD LTGAVLKFLP
FVRREESELK ELAMACLKQV DLCHKADELA GNLPYGEQRR LEIARALAIK PQIILLDEPA
AGMNPQEKQV LAEMVKAISK TGVTVFLVEH DMKFVMGISD RIAVLDYGVK IAEGTPEEIR
TNPKVIEAYL GKGAAHA