Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1941 |
Symbol | |
ID | 6781931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 2242890 |
End bp | 2245994 |
Gene Length | 3105 bp |
Protein Length | 1034 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642767933 |
Product | heavy metal efflux pump, CzcA family |
Protein accession | YP_002138751 |
Protein GI | 197118324 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAGAGA AAATAGTTTC TTATACACTG CGGCACAGGG CGATGATCCT CTTCCTGTCG CTCTTGATTA TCGCGTTCGG GCTCTACTCG TATTACCGCC TGCCCATCGA CGCCTTTCCC GACGTGACCA ACATCCAGGT CGAGGTGGTG AGCCATGCGG ACGGCCTTTC CGCCATCGAG ATCGAGAGAA ACGTCACCTA CCCGATAGAA ATGGCCATGC GCGGCCTGCC CGATATCGAG CAGATGCGCT CGGTCACCAA GTTCGGCCTT TCCATCGTCA CCATCGTCTT CAAGGACAAC GTCGACATCT ACTTCGCCCG GCAGCTCGTC TTCGAGCGGC TGGCGGAGGC GCGGGAGAAA GTCCCCAAGG GGGTCGAGGT CGCCATGGGA CCTATCGGCA CCGCCATGGG GGAGATCTAC CAGTACACCC TGGAAGGGAA GATGCCGGAG GATCCGCAGC AGAAGATCGC TTATCTCACC AACCTGCGCA CCGTCCAGGA GTGGATAGTC ACCCCGCAGC TGAAAAACGT GGCCGGCGTC AACGAGATCA ACTCCTTCGG CGGCTACTTC AAGCAGTACC AGGTGCTGGT CGCGCCGGAA AAGCTTTTGA AGCACGCGGT CACAGTCGAG GATGTCTACT CGGCCATCGG CAGCAACAAC GAAAACGTCG GCGGCAACCT CCTGGAGCGG GGCACGGACC AGTACATCGT CCGGGGCGTG GGGCTGATAC GGGACACAGC AGACATCGAG AACATAGTGC TCAAATCCGC GGGTGGCACG CCTACTTATC TGCGCGACGT GGCCCAGGTA AAGGTGGGGG AGGCGGTCCG GATGGGCGCC GCCATGAAAA ACGGCAAGGA CGAATGCGTG GGGGGCATCG TCATGATGCT GCGCGGCGAG AACAGCCGCG ACGTCGTGCG GCGGGTCGCG GCCAAGGTGA AGGAGATGAA CGAGAACAAC GTCCTTCCCG ACGGGATGAA GATCGTACCC TTCTACGACC GCAGCGACAT AGTCAAGGCG AGCGTGGGGA CGGTGAACAA GGCACTCATC GAGGGGGCCA TCCTGGTCCT CATCGTGCTC TACCTGCTGC TGAACAGCTT CCGGGGGAGC CTCGTGGTCC TGATCGCCCT GCCGCTGTCG CTTCTGGCCA CCTTCATCGT CATGAAGCTT GCCGGCATCA GCGCAAACCT GATGTCGCTG GGCGGCCTTG CCATTTCCAT CGGCATGATC ATCGACACCA CCATCATCCA GGTCGAGAAC GTGCAGCGGC ACCTGAGCGA GGAGGGGGGG AAGCATCCGA AGCTTGCCAC CGTCTTGAAA GCGGTGATGG AGGTGCGAAA GCCCAGCATC TTCGGAGAGC TGATCATCGC GCTTACCTTC ATCCCCATCA TCTCCCTGGA AGGGATCGAG GGGAAGATGT TCAGCCCGCT CGCCATCACG GTCGCCATAG CGCTCCTGGC CTCCCTGTTC CTCTCCATCT TCGTGATCCC TGTGCTCTGC ATCATGTTCC TGAAGCCGCA GCCGGAGAAG GAGAGCTACC TGATGCGGCA GGCGAATCAA CTTTATCTGC CGCTTCTCGA CTGGGCCATG CAGAAGCGGA AGCTGGTTCT TTCGGGGGGC GGATTCCTCC TGCTGGTTTC GCTCCTGCTG GTCACGAAGC TCGGGACGGA GTTCATACCT GTCATGGACG AGGGGTCCTT CGACATGGAC GTGGCGCTTC TTCCGGGAGT TTCGCTGGCG AAGGCGATGG AGGTGAACCA GCGGGCCGCG GAGAAGCTGC AGCAGTTCCA GGAACTGGAC ACGGTGATTT CCAGGACCGG GCAGACCGGC GTGGCGCTCG ACACCCGCGG CTCCGACAAA ACGGGGTATG TCGGCATCTA CAAGCCCAAA AGCGAATGGA AGCGCGACAT CACCAAGGAA GAGCTCACCA ACGAGATGCG CGAGTCGCTG GAGTCCATCG CCGGGATCAA CTTCGGCTTC AGCCAGCCGA TCCAGTGCCG CATCGACGAA CTGGTGGCCG GAACCCGTGC CCAGCTGATC GTGAAGCTTT TCGGCGAGGA CATAAACGTT TTGAGCGAGA AGTCCGCCGA GATCGCCAAG GTGCTTTCCA CCGTCAGGGG GGGGACGGAC CTGAACGCGG AGAAGGTTAC CGGCCAGCCC TACCTGACCG TGGACATCGA CCGGGCGAAG ATCGCGCGCT TCGGGCTTAA CATAAGCGAC GTACAGAAGG TGATCGAGAT CGCCGTTGCC GGCAAGGCTG CATCGCAGCT CTACGAGGAA AACCGCAGCT TCGACATCAC CGTCCGGCTC CCCGAGGAGC AGAGGAACTC GCTGGACGCC ATCAAGAACC TGCTGGTCAC GACCAAGACC GGCGTCAATG TCCCCCTGGA GCAGTTGGCC GAGGTGAAGA TGGTCGAGGG GCCGGCACAG ATCAGCCGCC AGGACGGGGT CAGGCGGATC GGCGTCGAGA TGAACGTCAC CGGCCGCGAC ATAGGTGGCT TCGTCGCCGA GGCGAAGCAG AAGATAAAGG AAAAGGTGAA GTTGCCGCCG GGATACTACC TGACCTGGGG CGGTCAGTTC GAGAACCAGC AGCGCGCCAT GAACAAGCTG ATGATCATCG GGCCGGTGGC AATCGCCCTG ATCCTCTTGC TTTTGTACGT GACCTTCAGG TCGATCAGGC TCGCCTTTCT GGTCATCTCC AACCTTCCCT TCGCCCTGAT AGGCGGCGTG TTCGCGCTCT TTCTTTCCGG CCAGTACCTC TCCGTTCCCG CCTCGGTCGG GTTCGTGGTG CTGTTCGGCG TGGCCGTGTT GAACGGCCTG GTCTTGGTGT CGCGCATATC GCAGCTCCGC GAGGAGGGTA TGGAAATGCA GGAGGCGATC CGGAAGGGGA GCCTGGACCG CCTGCGCCCG GTGCTGATGA CCGCGGCCAT TGCCATCTTC AGCCTGATAC CGATGCTCCT GGCCGGCGGG ACCGGGTCGG AGATCCAGAA ACCGCTGGCG ACGGTTGTGG TGGGGGGGCT CGTCACCTCG ACCTTGTTGA CCCTGCTCAT CATCCCTTCG GTGTATAGCT GGTTCGAGAA GAGGGAAATT CAAGAGGAAA GCTAG
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Protein sequence | MLEKIVSYTL RHRAMILFLS LLIIAFGLYS YYRLPIDAFP DVTNIQVEVV SHADGLSAIE IERNVTYPIE MAMRGLPDIE QMRSVTKFGL SIVTIVFKDN VDIYFARQLV FERLAEAREK VPKGVEVAMG PIGTAMGEIY QYTLEGKMPE DPQQKIAYLT NLRTVQEWIV TPQLKNVAGV NEINSFGGYF KQYQVLVAPE KLLKHAVTVE DVYSAIGSNN ENVGGNLLER GTDQYIVRGV GLIRDTADIE NIVLKSAGGT PTYLRDVAQV KVGEAVRMGA AMKNGKDECV GGIVMMLRGE NSRDVVRRVA AKVKEMNENN VLPDGMKIVP FYDRSDIVKA SVGTVNKALI EGAILVLIVL YLLLNSFRGS LVVLIALPLS LLATFIVMKL AGISANLMSL GGLAISIGMI IDTTIIQVEN VQRHLSEEGG KHPKLATVLK AVMEVRKPSI FGELIIALTF IPIISLEGIE GKMFSPLAIT VAIALLASLF LSIFVIPVLC IMFLKPQPEK ESYLMRQANQ LYLPLLDWAM QKRKLVLSGG GFLLLVSLLL VTKLGTEFIP VMDEGSFDMD VALLPGVSLA KAMEVNQRAA EKLQQFQELD TVISRTGQTG VALDTRGSDK TGYVGIYKPK SEWKRDITKE ELTNEMRESL ESIAGINFGF SQPIQCRIDE LVAGTRAQLI VKLFGEDINV LSEKSAEIAK VLSTVRGGTD LNAEKVTGQP YLTVDIDRAK IARFGLNISD VQKVIEIAVA GKAASQLYEE NRSFDITVRL PEEQRNSLDA IKNLLVTTKT GVNVPLEQLA EVKMVEGPAQ ISRQDGVRRI GVEMNVTGRD IGGFVAEAKQ KIKEKVKLPP GYYLTWGGQF ENQQRAMNKL MIIGPVAIAL ILLLLYVTFR SIRLAFLVIS NLPFALIGGV FALFLSGQYL SVPASVGFVV LFGVAVLNGL VLVSRISQLR EEGMEMQEAI RKGSLDRLRP VLMTAAIAIF SLIPMLLAGG TGSEIQKPLA TVVVGGLVTS TLLTLLIIPS VYSWFEKREI QEES
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